Analysis of interatomic Contacts of Structural Units in PDB entry:
7JZI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JZI entry

There are 4 chains in PDB entry 7JZI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 108LYS 205
B
 ALA 190ALA 311
C
 THR 108LYS 205
D
 GLU 188THR 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7JZI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
191 217Right-handed alpha
Helix 2
AA2
B
218 222Right-handed 310
Helix 3
AA3
B
225 234Right-handed alpha
Helix 4
AA4
B
235 237Right-handed 310
Helix 5
AA5
B
238 254Right-handed alpha
Helix 6
AA6
B
262 265Right-handed 310
Helix 7
AA7
B
266 272Right-handed alpha
Helix 8
AA8
B
283 311Right-handed alpha
Helix 9
AA9
D
189 217Right-handed alpha
Helix 10
AB1
D
218 222Right-handed 310
Helix 11
AB2
D
225 233Right-handed alpha
Helix 12
AB3
D
235 241Right-handed 310
Helix 13
AB4
D
242 254Right-handed alpha
Helix 14
AB5
D
262 266Right-handed 310
Helix 15
AB6
D
267 272Right-handed alpha
Helix 16
AB7
D
283 319Right-handed alpha
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There are 6 sheets in PDB entry 7JZI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 118first strand
Strand 2
A
129 135anti-parallel
Strand 3
A
166 172anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 123first strand
Strand 2
A
200 204parallel
Strand 3
A
181 189anti-parallel
Strand 4
A
141 146anti-parallel
Strand 5
A
152 155anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 123first strand
Strand 2
A
200 204parallel
Strand 3
A
181 189anti-parallel
Strand 4
A
192 193anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
114 118first strand
Strand 2
C
129 135anti-parallel
Strand 3
C
166 172anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
122 124first strand
Strand 2
C
200 205parallel
Strand 3
C
181 189anti-parallel
Strand 4
C
141 146anti-parallel
Strand 5
C
152 155anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
122 124first strand
Strand 2
C
200 205parallel
Strand 3
C
181 189anti-parallel
Strand 4
C
192 193anti-parallel
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