Analysis of interatomic Contacts of Structural Units in PDB entry:
7JZJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7JZJ entry

There are 3 chains in PDB entry 7JZJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 43	SER 316
B	GLY 44	PRO 321
C	ASP 45	MET 241

There are 29 helices in PDB entry 7JZJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	60	65	Right-handed alpha
Helix 2	AA2	A	107	117	Right-handed alpha
Helix 3	AA3	A	147	153	Right-handed alpha
Helix 4	AA4	A	159	163	Right-handed alpha
Helix 5	AA5	A	233	244	Right-handed alpha
Helix 6	AA6	A	245	247	Right-handed 310
Helix 7	AA7	A	253	256	Right-handed 310
Helix 8	AA8	A	264	273	Right-handed alpha
Helix 9	AA9	B	60	65	Right-handed alpha
Helix 10	AB1	B	107	117	Right-handed alpha
Helix 11	AB2	B	147	153	Right-handed alpha
Helix 12	AB3	B	159	163	Right-handed alpha
Helix 13	AB4	B	233	244	Right-handed alpha
Helix 14	AB5	B	245	247	Right-handed 310
Helix 15	AB6	B	254	256	Right-handed 310
Helix 16	AB7	B	264	273	Right-handed alpha
Helix 17	AB8	C	60	65	Right-handed alpha
Helix 18	AB9	C	107	117	Right-handed alpha
Helix 19	AC1	C	147	153	Right-handed alpha
Helix 20	AC2	C	158	163	Right-handed alpha
Helix 21	AC3	C	234	244	Right-handed alpha
Helix 22	AC4	C	264	271	Right-handed alpha
Helix 23	AC5	D	60	65	Right-handed alpha
Helix 24	AC6	D	107	117	Right-handed alpha
Helix 25	AC7	D	147	153	Right-handed alpha
Helix 26	AC8	D	159	163	Right-handed alpha
Helix 27	AC9	D	237	245	Right-handed alpha
Helix 28	AD1	D	254	256	Right-handed 310
Helix 29	AD2	D	264	271	Right-handed alpha

There are 17 sheets in PDB entry 7JZJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	173	185	parallel
Strand 3	A	71	83	anti-parallel
Strand 4	A	86	101	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	125	first strand
Strand 2	A	132	138	anti-parallel
Strand 3	A	154	158	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	216	217	first strand
Strand 2	A	203	208	anti-parallel
Strand 3	A	304	309	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	248	249	first strand
Strand 2	A	258	262	anti-parallel
Strand 3	A	284	288	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	55	first strand
Strand 2	B	173	186	parallel
Strand 3	B	70	83	anti-parallel
Strand 4	B	86	101	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	119	125	first strand
Strand 2	B	132	138	anti-parallel
Strand 3	B	154	158	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	216	217	first strand
Strand 2	B	204	208	anti-parallel
Strand 3	B	304	308	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	248	253	first strand
Strand 2	B	258	262	anti-parallel
Strand 3	B	284	288	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	55	first strand
Strand 2	C	173	185	parallel
Strand 3	C	71	82	anti-parallel
Strand 4	C	92	101	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	119	125	first strand
Strand 2	C	132	138	anti-parallel
Strand 3	C	154	157	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	216	217	first strand
Strand 2	C	203	208	anti-parallel
Strand 3	C	304	309	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	248	253	first strand
Strand 2	C	258	262	anti-parallel
Strand 3	C	284	288	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	54	55	first strand
Strand 2	D	173	185	parallel
Strand 3	D	71	83	anti-parallel
Strand 4	D	86	87	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	54	55	first strand
Strand 2	D	173	185	parallel
Strand 3	D	71	83	anti-parallel
Strand 4	D	92	101	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	119	124	first strand
Strand 2	D	132	138	anti-parallel
Strand 3	D	154	158	anti-parallel
Strand 4	D	319	320	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	216	217	first strand
Strand 2	D	203	208	anti-parallel
Strand 3	D	304	309	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	248	253	first strand
Strand 2	D	258	262	anti-parallel
Strand 3	D	284	288	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7JZJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7JZJ