Analysis of interatomic Contacts of Structural Units in PDB entry:
7JZT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7JZT entry

There are 3 chains in PDB entry 7JZT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 45	CYS 311
B	PRO 47	ILE 307
C	ASP 45	ILE 285

There are 29 helices in PDB entry 7JZT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	60	65	Right-handed alpha
Helix 2	AA2	A	107	117	Right-handed alpha
Helix 3	AA3	A	147	153	Right-handed alpha
Helix 4	AA4	A	233	235	Right-handed 310
Helix 5	AA5	A	236	244	Right-handed alpha
Helix 6	AA6	A	266	271	Right-handed alpha
Helix 7	AA7	B	60	65	Right-handed alpha
Helix 8	AA8	B	107	117	Right-handed alpha
Helix 9	AA9	B	147	153	Right-handed alpha
Helix 10	AB1	B	158	163	Right-handed alpha
Helix 11	AB2	B	233	235	Right-handed 310
Helix 12	AB3	B	236	247	Right-handed alpha
Helix 13	AB4	B	253	256	Right-handed 310
Helix 14	AB5	B	264	272	Right-handed alpha
Helix 15	AB6	C	60	65	Right-handed alpha
Helix 16	AB7	C	107	118	Right-handed alpha
Helix 17	AB8	C	147	153	Right-handed alpha
Helix 18	AB9	C	159	163	Right-handed alpha
Helix 19	AC1	C	233	242	Right-handed alpha
Helix 20	AC2	C	243	247	Right-handed 310
Helix 21	AC3	C	253	256	Right-handed 310
Helix 22	AC4	C	264	272	Right-handed alpha
Helix 23	AC5	D	60	65	Right-handed alpha
Helix 24	AC6	D	107	118	Right-handed alpha
Helix 25	AC7	D	147	153	Right-handed alpha
Helix 26	AC8	D	159	163	Right-handed alpha
Helix 27	AC9	D	236	241	Right-handed alpha
Helix 28	AD1	D	242	244	Right-handed 310
Helix 29	AD2	D	253	256	Right-handed 310

There are 17 sheets in PDB entry 7JZT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	47	first strand
Strand 2	A	122	124	anti-parallel
Strand 3	A	132	135	anti-parallel
Strand 4	A	155	158	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	180	182	parallel
Strand 3	A	72	83	anti-parallel
Strand 4	A	86	100	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	180	182	parallel
Strand 3	A	72	83	anti-parallel
Strand 4	A	173	174	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	206	207	first strand
Strand 2	A	216	217	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	258	260	first strand
Strand 2	A	286	288	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	55	first strand
Strand 2	B	175	185	parallel
Strand 3	B	71	83	anti-parallel
Strand 4	B	86	95	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	55	first strand
Strand 2	B	175	185	parallel
Strand 3	B	71	83	anti-parallel
Strand 4	B	99	101	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	120	123	first strand
Strand 2	B	134	137	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	206	208	first strand
Strand 2	B	304	306	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	249	251	first strand
Strand 2	B	258	262	anti-parallel
Strand 3	B	284	288	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	55	first strand
Strand 2	C	173	182	parallel
Strand 3	C	72	82	anti-parallel
Strand 4	C	92	100	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	120	125	first strand
Strand 2	C	132	137	anti-parallel
Strand 3	C	154	158	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	216	217	first strand
Strand 2	C	206	207	anti-parallel
Strand 3	C	305	306	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	249	251	first strand
Strand 2	C	258	261	anti-parallel
Strand 3	C	285	288	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	54	55	first strand
Strand 2	D	175	185	parallel
Strand 3	D	71	83	anti-parallel
Strand 4	D	86	100	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	121	125	first strand
Strand 2	D	132	136	anti-parallel
Strand 3	D	157	158	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	249	251	first strand
Strand 2	D	258	261	anti-parallel
Strand 3	D	286	288	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7JZT

Analysis of interatomic Contacts of Structural Units in PDB entry:
7JZT