Analysis of interatomic Contacts of Structural Units in PDB entry:
7K0Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7K0Q entry

There are 4 chains in PDB entry 7K0Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 51LEU 473
B
 GLY 53LEU 544
C
 ARG 8MET 56
D
 ASN 11TYR 153
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 7K0Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 64Right-handed alpha
Helix 2
AA2
A
77 81Right-handed 310
Helix 3
AA3
A
114 129Right-handed alpha
Helix 4
AA4
A
142 156Right-handed alpha
Helix 5
AA5
A
166 179Right-handed alpha
Helix 6
AA6
A
192 202Right-handed alpha
Helix 7
AA7
A
213 231Right-handed alpha
Helix 8
AA8
A
231 236Right-handed alpha
Helix 9
AA9
A
256 268Right-handed alpha
Helix 10
AB1
A
288 294Right-handed alpha
Helix 11
AB2
A
296 300Right-handed 310
Helix 12
AB3
A
321 326Right-handed alpha
Helix 13
AB4
A
327 332Right-handed alpha
Helix 14
AB5
A
332 337Right-handed alpha
Helix 15
AB6
A
342 359Right-handed alpha
Helix 16
AB7
A
360 378Right-handed alpha
Helix 17
AB8
A
404 421Right-handed alpha
Helix 18
AB9
A
453 472Right-handed alpha
Helix 19
AC1
B
67 94Right-handed alpha
Helix 20
AC2
B
105 109Right-handed 310
Helix 21
AC3
B
116 119Right-handed 310
Helix 22
AC4
B
120 126Right-handed alpha
Helix 23
AC5
B
127 134Right-handed 310
Helix 24
AC6
B
186 200Right-handed alpha
Helix 25
AC7
B
213 228Right-handed alpha
Helix 26
AC8
B
237 250Right-handed alpha
Helix 27
AC9
B
263 273Right-handed alpha
Helix 28
AD1
B
284 299Right-handed alpha
Helix 29
AD2
B
326 338Right-handed alpha
Helix 30
AD3
B
358 363Right-handed alpha
Helix 31
AD4
B
391 402Right-handed alpha
Helix 32
AD5
B
402 408Right-handed alpha
Helix 33
AD6
B
412 427Right-handed alpha
Helix 34
AD7
B
433 457Right-handed alpha
Helix 35
AD8
B
475 489Right-handed alpha
Helix 36
AD9
B
517 536Right-handed alpha
Helix 37
AE1
C
9 24Right-handed alpha
Helix 38
AE2
C
30 56Right-handed alpha
Helix 39
AE3
D
12 16Right-handed alpha
Helix 40
AE4
D
17 19Right-handed 310
Helix 41
AE5
D
21 40Right-handed alpha
Helix 42
AE6
D
44 66Right-handed alpha
Helix 43
AE7
D
78 82Right-handed 310
Helix 44
AE8
D
84 89Right-handed alpha
Helix 45
AE9
D
90 93Right-handed 310
Helix 46
AF1
D
96 117Right-handed alpha
Helix 47
AF2
D
120 136Right-handed alpha
Helix 48
AF3
D
137 139Right-handed 310
Helix 49
AF4
D
146 150Right-handed 310
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There are 6 sheets in PDB entry 7K0Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 95first strand
Strand 2
A
98 102anti-parallel
Strand 3
A
424 425parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 164first strand
Strand 2
A
316 320anti-parallel
Strand 3
A
302 306anti-parallel
Strand 4
A
270 274parallel
Strand 5
A
240 245parallel
Strand 6
A
184 188parallel
Strand 7
A
205 209parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
383 386first strand
Strand 2
A
393 398anti-parallel
Strand 3
A
444 447anti-parallel
Strand 4
A
427 428anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 152first strand
Strand 2
B
161 172anti-parallel
Strand 3
B
491 492parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
231 235first strand
Strand 2
B
386 390anti-parallel
Strand 3
B
372 376anti-parallel
Strand 4
B
340 344parallel
Strand 5
B
310 315parallel
Strand 6
B
255 259parallel
Strand 7
B
276 280parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
468 472first strand
Strand 2
B
507 511anti-parallel
Strand 3
B
494 495anti-parallel
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