Analysis of interatomic Contacts of Structural Units in PDB entry:
7K0Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7K0Y entry

There are 7 chains in PDB entry 7K0Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 7MET 4128
B
 LYS 31TYR 534
C
 ASN 6ILE 732
D
 G 1 G 24
E
 A 25 A 37
F
 T 4 G 24
G
 A 25 C 40
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are230 helices in PDB entry 7K0Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 21Right-handed alpha
Helix 2
AA2
A
27 42Right-handed alpha
Helix 3
AA3
A
47 59Right-handed alpha
Helix 4
AA4
A
67 72Right-handed alpha
Helix 5
AA5
A
79 93Right-handed alpha
Helix 6
AA6
A
103 118Right-handed alpha
Helix 7
AA7
A
125 138Right-handed alpha
Helix 8
AA8
A
142 146Right-handed 310
Helix 9
AA9
A
148 159Right-handed alpha
Helix 10
AB1
A
170 184Right-handed alpha
Helix 11
AB2
A
193 210Right-handed alpha
Helix 12
AB3
A
216 231Right-handed alpha
Helix 13
AB4
A
243 256Right-handed alpha
Helix 14
AB5
A
267 276Right-handed alpha
Helix 15
AB6
A
278 282Right-handed 310
Helix 16
AB7
A
289 301Right-handed alpha
Helix 17
AB8
A
309 328Right-handed alpha
Helix 18
AB9
A
334 350Right-handed alpha
Helix 19
AC1
A
355 370Right-handed alpha
Helix 20
AC2
A
371 374Right-handed 310
Helix 21
AC3
A
379 384Right-handed alpha
Helix 22
AC4
A
386 397Right-handed alpha
Helix 23
AC5
A
409 422Right-handed alpha
Helix 24
AC6
A
431 445Right-handed alpha
Helix 25
AC7
A
453 468Right-handed alpha
Helix 26
AC8
A
478 491Right-handed alpha
Helix 27
AC9
A
524 526Right-handed 310
Helix 28
AD1
A
527 534Right-handed alpha
Helix 29
AD2
A
559 576Right-handed alpha
Helix 30
AD3
A
620 634Right-handed alpha
Helix 31
AD4
A
642 644Right-handed 310
Helix 32
AD5
A
645 658Right-handed alpha
Helix 33
AD6
A
667 680Right-handed alpha
Helix 34
AD7
A
702 718Right-handed alpha
Helix 35
AD8
A
719 721Right-handed 310
Helix 36
AD9
A
722 734Right-handed alpha
Helix 37
AE1
A
744 751Right-handed 310
Helix 38
AE2
A
752 758Right-handed alpha
Helix 39
AE3
A
762 780Right-handed alpha
Helix 40
AE4
A
792 796Right-handed 310
Helix 41
AE5
A
817 822Right-handed alpha
Helix 42
AE6
A
827 835Right-handed alpha
Helix 43
AE7
A
847 862Right-handed alpha
Helix 44
AE8
A
878 883Right-handed alpha
Helix 45
AE9
A
910 920Right-handed alpha
Helix 46
AF1
A
923 945Right-handed alpha
Helix 47
AF2
A
958 974Right-handed alpha
Helix 48
AF3
A
977 996Right-handed alpha
Helix 49
AF4
A
1004 1018Right-handed alpha
Helix 50
AF5
A
1024 1043Right-handed alpha
Helix 51
AF6
A
1055 1068Right-handed alpha
Helix 52
AF7
A
1071 1074Right-handed 310
Helix 53
AF8
A
1075 1086Right-handed alpha
Helix 54
AF9
A
1103 1114Right-handed alpha
Helix 55
AG1
A
1123 1133Right-handed alpha
Helix 56
AG2
A
1167 1175Right-handed alpha
Helix 57
AG3
A
1180 1193Right-handed alpha
Helix 58
AG4
A
1203 1216Right-handed alpha
Helix 59
AG5
A
1221 1226Right-handed alpha
Helix 60
AG6
A
1252 1267Right-handed alpha
Helix 61
AG7
A
1267 1273Right-handed alpha
Helix 62
AG8
A
1277 1283Right-handed alpha
Helix 63
AG9
A
1289 1298Right-handed alpha
Helix 64
AH1
A
1327 1335Right-handed alpha
Helix 65
AH2
A
1337 1349Right-handed alpha
Helix 66
AH3
A
1367 1377Right-handed alpha
Helix 67
AH4
A
1394 1404Right-handed alpha
Helix 68
AH5
A
1412 1420Right-handed alpha
Helix 69
AH6
A
1424 1432Right-handed alpha
Helix 70
AH7
A
1446 1462Right-handed alpha
Helix 71
AH8
A
1463 1468Right-handed alpha
Helix 72
AH9
A
1479 1490Right-handed alpha
Helix 73
AI1
A
1508 1518Right-handed alpha
Helix 74
AI2
A
1525 1533Right-handed alpha
Helix 75
AI3
A
1556 1564Right-handed alpha
Helix 76
AI4
A
1565 1574Right-handed alpha
Helix 77
AI5
A
1578 1585Right-handed alpha
Helix 78
AI6
A
1589 1607Right-handed alpha
Helix 79
AI7
A
1611 1623Right-handed alpha
Helix 80
AI8
A
1624 1629Right-handed 310
Helix 81
AI9
A
1638 1656Right-handed alpha
Helix 82
AJ1
A
1667 1681Right-handed alpha
Helix 83
AJ2
A
1685 1694Right-handed alpha
Helix 84
AJ3
A
1706 1719Right-handed alpha
Helix 85
AJ4
A
1735 1753Right-handed alpha
Helix 86
AJ5
A
1758 1767Right-handed alpha
Helix 87
AJ6
A
1774 1787Right-handed alpha
Helix 88
AJ7
A
1790 1807Right-handed alpha
Helix 89
AJ8
A
1812 1830Right-handed alpha
Helix 90
AJ9
A
1837 1842Right-handed alpha
Helix 91
AK1
A
1843 1852Right-handed alpha
Helix 92
AK2
A
1859 1883Right-handed alpha
Helix 93
AK3
A
1886 1891Right-handed alpha
Helix 94
AK4
A
1895 1900Right-handed alpha
Helix 95
AK5
A
1910 1924Right-handed alpha
Helix 96
AK6
A
1934 1954Right-handed alpha
Helix 97
AK7
A
1961 1967Right-handed alpha
Helix 98
AK8
A
1970 1974Right-handed 310
Helix 99
AK9
A
1977 1982Right-handed alpha
Helix 100
AL1
A
2001 2016Right-handed alpha
Helix 101
AL2
A
2093 2106Right-handed alpha
Helix 102
AL3
A
2126 2134Right-handed alpha
Helix 103
AL4
A
2139 2153Right-handed alpha
Helix 104
AL5
A
2157 2161Right-handed 310
Helix 105
AL6
A
2165 2174Right-handed alpha
Helix 106
AL7
A
2182 2196Right-handed alpha
Helix 107
AL8
A
2205 2222Right-handed alpha
Helix 108
AL9
A
2227 2246Right-handed alpha
Helix 109
AM1
A
2254 2261Right-handed alpha
Helix 110
AM2
A
2270 2284Right-handed alpha
Helix 111
AM3
A
2295 2308Right-handed alpha
Helix 112
AM4
A
2315 2333Right-handed alpha
Helix 113
AM5
A
2337 2356Right-handed alpha
Helix 114
AM6
A
2356 2371Right-handed alpha
Helix 115
AM7
A
2385 2389Right-handed 310
Helix 116
AM8
A
2391 2402Right-handed alpha
Helix 117
AM9
A
2403 2405Right-handed 310
Helix 118
AN1
A
2411 2418Right-handed alpha
Helix 119
AN2
A
2420 2424Right-handed 310
Helix 120
AN3
A
2430 2442Right-handed alpha
Helix 121
AN4
A
2447 2455Right-handed alpha
Helix 122
AN5
A
2466 2483Right-handed alpha
Helix 123
AN6
A
2497 2503Right-handed alpha
Helix 124
AN7
A
2507 2511Right-handed 310
Helix 125
AN8
A
2516 2526Right-handed alpha
Helix 126
AN9
A
2534 2542Right-handed alpha
Helix 127
AO1
A
2553 2565Right-handed alpha
Helix 128
AO2
A
2786 2790Right-handed 310
Helix 129
AO3
A
2791 2799Right-handed alpha
Helix 130
AO4
A
2801 2820Right-handed alpha
Helix 131
AO5
A
2825 2847Right-handed alpha
Helix 132
AO6
A
2851 2863Right-handed alpha
Helix 133
AO7
A
2874 2881Right-handed alpha
Helix 134
AO8
A
2885 2897Right-handed alpha
Helix 135
AO9
A
2919 2931Right-handed alpha
Helix 136
AP1
A
2951 2958Right-handed alpha
Helix 137
AP2
A
2971 2977Right-handed alpha
Helix 138
AP3
A
2987 3004Right-handed alpha
Helix 139
AP4
A
3009 3017Right-handed alpha
Helix 140
AP5
A
3036 3053Right-handed alpha
Helix 141
AP6
A
3061 3069Right-handed alpha
Helix 142
AP7
A
3076 3081Right-handed alpha
Helix 143
AP8
A
3083 3091Right-handed alpha
Helix 144
AP9
A
3097 3115Right-handed alpha
Helix 145
AQ1
A
3123 3130Right-handed alpha
Helix 146
AQ2
A
3131 3147Right-handed alpha
Helix 147
AQ3
A
3154 3165Right-handed alpha
Helix 148
AQ4
A
3175 3197Right-handed alpha
Helix 149
AQ5
A
3227 3231Right-handed alpha
Helix 150
AQ6
A
3231 3249Right-handed alpha
Helix 151
AQ7
A
3251 3262Right-handed alpha
Helix 152
AQ8
A
3265 3269Right-handed 310
Helix 153
AQ9
A
3272 3288Right-handed alpha
Helix 154
AR1
A
3295 3303Right-handed alpha
Helix 155
AR2
A
3320 3341Right-handed alpha
Helix 156
AR3
A
3346 3350Right-handed 310
Helix 157
AR4
A
3354 3361Right-handed alpha
Helix 158
AR5
A
3371 3394Right-handed alpha
Helix 159
AR6
A
3409 3429Right-handed alpha
Helix 160
AR7
A
3433 3440Right-handed alpha
Helix 161
AR8
A
3441 3456Right-handed alpha
Helix 162
AR9
A
3461 3463Right-handed 310
Helix 163
AS1
A
3464 3475Right-handed alpha
Helix 164
AS2
A
3480 3488Right-handed alpha
Helix 165
AS3
A
3498 3503Right-handed alpha
Helix 166
AS4
A
3514 3525Right-handed alpha
Helix 167
AS5
A
3530 3538Right-handed alpha
Helix 168
AS6
A
3547 3562Right-handed alpha
Helix 169
AS7
A
3567 3577Right-handed alpha
Helix 170
AS8
A
3580 3594Right-handed alpha
Helix 171
AS9
A
3604 3616Right-handed alpha
Helix 172
AT1
A
3620 3627Right-handed alpha
Helix 173
AT2
A
3632 3637Right-handed alpha
Helix 174
AT3
A
3641 3651Right-handed alpha
Helix 175
AT4
A
3660 3670Right-handed alpha
Helix 176
AT5
A
3758 3776Right-handed alpha
Helix 177
AT6
A
3778 3783Right-handed alpha
Helix 178
AT7
A
3812 3820Right-handed alpha
Helix 179
AT8
A
3821 3830Right-handed alpha
Helix 180
AT9
A
3834 3848Right-handed alpha
Helix 181
AU1
A
3853 3860Right-handed alpha
Helix 182
AU2
A
3863 3876Right-handed alpha
Helix 183
AU3
A
3882 3889Right-handed alpha
Helix 184
AU4
A
3893 3918Right-handed alpha
Helix 185
AU5
A
3965 3970Right-handed alpha
Helix 186
AU6
A
3978 3992Right-handed alpha
Helix 187
AU7
A
3996 4002Right-handed alpha
Helix 188
AU8
A
4003 4008Right-handed alpha
Helix 189
AU9
A
4016 4023Right-handed alpha
Helix 190
AV1
A
4039 4053Right-handed alpha
Helix 191
AV2
A
4057 4069Right-handed alpha
Helix 192
AV3
A
4074 4081Right-handed alpha
Helix 193
AV4
A
4088 4092Right-handed 310
Helix 194
AV5
A
4099 4112Right-handed alpha
Helix 195
AV6
A
4113 4119Right-handed alpha
Helix 196
AV7
B
58 78Right-handed alpha
Helix 197
AV8
B
112 120Right-handed alpha
Helix 198
AV9
B
123 135Right-handed alpha
Helix 199
AW1
B
144 156Right-handed alpha
Helix 200
AW2
B
179 196Right-handed alpha
Helix 201
AW3
B
239 244Right-handed alpha
Helix 202
AW4
B
312 314Right-handed 310
Helix 203
AW5
B
330 337Right-handed alpha
Helix 204
AW6
B
378 392Right-handed alpha
Helix 205
AW7
B
457 469Right-handed alpha
Helix 206
AW8
B
480 496Right-handed alpha
Helix 207
AW9
B
511 519Right-handed alpha
Helix 208
AX1
B
521 527Right-handed alpha
Helix 209
AX2
C
29 48Right-handed alpha
Helix 210
AX3
C
88 96Right-handed alpha
Helix 211
AX4
C
108 122Right-handed alpha
Helix 212
AX5
C
147 158Right-handed alpha
Helix 213
AX6
C
198 217Right-handed alpha
Helix 214
AX7
C
218 223Right-handed alpha
Helix 215
AX8
C
228 233Right-handed alpha
Helix 216
AX9
C
306 308Right-handed 310
Helix 217
AY1
C
324 331Right-handed alpha
Helix 218
AY2
C
371 385Right-handed alpha
Helix 219
AY3
C
447 461Right-handed alpha
Helix 220
AY4
C
484 500Right-handed alpha
Helix 221
AY5
C
509 516Right-handed alpha
Helix 222
AY6
C
520 526Right-handed alpha
Helix 223
AY7
C
526 537Right-handed alpha
Helix 224
AY8
C
549 554Right-handed alpha
Helix 225
AY9
C
596 605Right-handed alpha
Helix 226
AZ1
C
610 626Right-handed alpha
Helix 227
AZ2
C
628 649Right-handed alpha
Helix 228
AZ3
C
651 669Right-handed alpha
Helix 229
AZ4
C
671 680Right-handed alpha
Helix 230
AZ5
C
698 705Right-handed alpha
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There are 12 sheets in PDB entry 7K0Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
893 894first strand
Strand 2
A
905 906anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3727 3728first strand
Strand 2
A
3736 3741anti-parallel
Strand 3
A
3747 3753anti-parallel
Strand 4
A
3800 3804anti-parallel
Strand 5
A
3793 3797anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3809 3811first strand
Strand 2
A
3928 3931anti-parallel
Strand 3
A
3937 3939anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 104first strand
Strand 2
B
82 88anti-parallel
Strand 3
B
35 43parallel
Strand 4
B
161 170parallel
Strand 5
B
199 204parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
268 272first strand
Strand 2
B
258 262anti-parallel
Strand 3
B
344 352parallel
Strand 4
B
394 401anti-parallel
Strand 5
B
409 415anti-parallel
Strand 6
B
432 436anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
286 289first strand
Strand 2
C
310 315anti-parallel
Strand 3
C
320 321anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
298 303first strand
Strand 2
C
290 295anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
325 329first strand
Strand 2
B
316 322anti-parallel
Strand 3
C
277 280anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 84first strand
Strand 2
C
52 59anti-parallel
Strand 3
C
8 15parallel
Strand 4
C
129 135parallel
Strand 5
C
160 164parallel
Strand 6
C
224 225parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
247 253first strand
Strand 2
C
257 265anti-parallel
Strand 3
C
362 366anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
339 346first strand
Strand 2
C
390 396anti-parallel
Strand 3
C
404 408anti-parallel
Strand 4
C
422 423anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
464 466first strand
Strand 2
C
473 475anti-parallel
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