Analysis of interatomic Contacts of Structural Units in PDB entry:
7K19


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7K19 entry

There are 4 chains in PDB entry 7K19 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 8MET 4128
D
G 1 G 24
F
C 17 G 24
G
A 25 C 40
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are198 helices in PDB entry 7K19. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
9 20Right-handed alpha
Helix 2
AA2
A
25 40Right-handed alpha
Helix 3
AA3
A
48 59Right-handed alpha
Helix 4
AA4
A
64 71Right-handed alpha
Helix 5
AA5
A
78 96Right-handed alpha
Helix 6
AA6
A
104 117Right-handed alpha
Helix 7
AA7
A
124 138Right-handed alpha
Helix 8
AA8
A
142 147Right-handed alpha
Helix 9
AA9
A
148 162Right-handed alpha
Helix 10
AB1
A
168 184Right-handed alpha
Helix 11
AB2
A
195 209Right-handed alpha
Helix 12
AB3
A
216 232Right-handed alpha
Helix 13
AB4
A
243 256Right-handed alpha
Helix 14
AB5
A
266 276Right-handed alpha
Helix 15
AB6
A
289 300Right-handed alpha
Helix 16
AB7
A
301 303Right-handed 310
Helix 17
AB8
A
307 330Right-handed alpha
Helix 18
AB9
A
334 350Right-handed alpha
Helix 19
AC1
A
359 371Right-handed alpha
Helix 20
AC2
A
379 384Right-handed alpha
Helix 21
AC3
A
386 394Right-handed alpha
Helix 22
AC4
A
409 422Right-handed alpha
Helix 23
AC5
A
431 445Right-handed alpha
Helix 24
AC6
A
453 468Right-handed alpha
Helix 25
AC7
A
477 491Right-handed alpha
Helix 26
AC8
A
527 536Right-handed alpha
Helix 27
AC9
A
560 576Right-handed alpha
Helix 28
AD1
A
619 632Right-handed alpha
Helix 29
AD2
A
642 644Right-handed 310
Helix 30
AD3
A
645 660Right-handed alpha
Helix 31
AD4
A
665 680Right-handed alpha
Helix 32
AD5
A
701 718Right-handed alpha
Helix 33
AD6
A
723 734Right-handed alpha
Helix 34
AD7
A
744 747Right-handed 310
Helix 35
AD8
A
748 753Right-handed alpha
Helix 36
AD9
A
763 780Right-handed alpha
Helix 37
AE1
A
792 799Right-handed 310
Helix 38
AE2
A
847 862Right-handed alpha
Helix 39
AE3
A
866 870Right-handed 310
Helix 40
AE4
A
878 883Right-handed alpha
Helix 41
AE5
A
910 918Right-handed alpha
Helix 42
AE6
A
923 946Right-handed alpha
Helix 43
AE7
A
958 974Right-handed alpha
Helix 44
AE8
A
978 983Right-handed alpha
Helix 45
AE9
A
984 996Right-handed alpha
Helix 46
AF1
A
1003 1018Right-handed alpha
Helix 47
AF2
A
1022 1044Right-handed alpha
Helix 48
AF3
A
1055 1068Right-handed alpha
Helix 49
AF4
A
1073 1084Right-handed alpha
Helix 50
AF5
A
1099 1114Right-handed alpha
Helix 51
AF6
A
1123 1142Right-handed alpha
Helix 52
AF7
A
1143 1145Right-handed 310
Helix 53
AF8
A
1165 1175Right-handed alpha
Helix 54
AF9
A
1176 1178Right-handed 310
Helix 55
AG1
A
1180 1195Right-handed alpha
Helix 56
AG2
A
1196 1198Right-handed 310
Helix 57
AG3
A
1203 1216Right-handed alpha
Helix 58
AG4
A
1221 1226Right-handed alpha
Helix 59
AG5
A
1241 1245Right-handed 310
Helix 60
AG6
A
1250 1266Right-handed alpha
Helix 61
AG7
A
1267 1273Right-handed alpha
Helix 62
AG8
A
1278 1283Right-handed alpha
Helix 63
AG9
A
1289 1300Right-handed alpha
Helix 64
AH1
A
1326 1350Right-handed alpha
Helix 65
AH2
A
1351 1353Right-handed 310
Helix 66
AH3
A
1354 1359Right-handed alpha
Helix 67
AH4
A
1367 1377Right-handed alpha
Helix 68
AH5
A
1390 1406Right-handed alpha
Helix 69
AH6
A
1411 1420Right-handed alpha
Helix 70
AH7
A
1424 1431Right-handed alpha
Helix 71
AH8
A
1444 1461Right-handed alpha
Helix 72
AH9
A
1477 1492Right-handed alpha
Helix 73
AI1
A
1506 1519Right-handed alpha
Helix 74
AI2
A
1525 1533Right-handed alpha
Helix 75
AI3
A
1557 1564Right-handed alpha
Helix 76
AI4
A
1565 1574Right-handed alpha
Helix 77
AI5
A
1577 1584Right-handed alpha
Helix 78
AI6
A
1589 1607Right-handed alpha
Helix 79
AI7
A
1613 1624Right-handed alpha
Helix 80
AI8
A
1625 1630Right-handed 310
Helix 81
AI9
A
1640 1655Right-handed alpha
Helix 82
AJ1
A
1667 1679Right-handed alpha
Helix 83
AJ2
A
1686 1688Right-handed 310
Helix 84
AJ3
A
1689 1694Right-handed alpha
Helix 85
AJ4
A
1695 1700Right-handed alpha
Helix 86
AJ5
A
1705 1722Right-handed alpha
Helix 87
AJ6
A
1733 1751Right-handed alpha
Helix 88
AJ7
A
1757 1767Right-handed alpha
Helix 89
AJ8
A
1774 1786Right-handed alpha
Helix 90
AJ9
A
1790 1807Right-handed alpha
Helix 91
AK1
A
1812 1823Right-handed alpha
Helix 92
AK2
A
1824 1830Right-handed alpha
Helix 93
AK3
A
1837 1843Right-handed alpha
Helix 94
AK4
A
1843 1852Right-handed alpha
Helix 95
AK5
A
1859 1882Right-handed alpha
Helix 96
AK6
A
1886 1891Right-handed alpha
Helix 97
AK7
A
1895 1900Right-handed alpha
Helix 98
AK8
A
1910 1922Right-handed alpha
Helix 99
AK9
A
1934 1955Right-handed alpha
Helix 100
AL1
A
1970 1974Right-handed 310
Helix 101
AL2
A
1977 1982Right-handed alpha
Helix 102
AL3
A
2035 2045Right-handed alpha
Helix 103
AL4
A
2087 2091Right-handed 310
Helix 104
AL5
A
2093 2107Right-handed alpha
Helix 105
AL6
A
2126 2135Right-handed alpha
Helix 106
AL7
A
2139 2151Right-handed alpha
Helix 107
AL8
A
2157 2161Right-handed 310
Helix 108
AL9
A
2162 2164Right-handed 310
Helix 109
AM1
A
2165 2174Right-handed alpha
Helix 110
AM2
A
2182 2196Right-handed alpha
Helix 111
AM3
A
2205 2222Right-handed alpha
Helix 112
AM4
A
2227 2246Right-handed alpha
Helix 113
AM5
A
2254 2261Right-handed alpha
Helix 114
AM6
A
2270 2282Right-handed alpha
Helix 115
AM7
A
2295 2309Right-handed alpha
Helix 116
AM8
A
2312 2333Right-handed alpha
Helix 117
AM9
A
2338 2354Right-handed alpha
Helix 118
AN1
A
2357 2371Right-handed alpha
Helix 119
AN2
A
2378 2385Right-handed alpha
Helix 120
AN3
A
2391 2402Right-handed alpha
Helix 121
AN4
A
2411 2418Right-handed alpha
Helix 122
AN5
A
2419 2425Right-handed alpha
Helix 123
AN6
A
2428 2442Right-handed alpha
Helix 124
AN7
A
2443 2446Right-handed 310
Helix 125
AN8
A
2447 2459Right-handed alpha
Helix 126
AN9
A
2466 2481Right-handed alpha
Helix 127
AO1
A
2497 2509Right-handed alpha
Helix 128
AO2
A
2516 2526Right-handed alpha
Helix 129
AO3
A
2536 2545Right-handed alpha
Helix 130
AO4
A
2553 2565Right-handed alpha
Helix 131
AO5
A
2790 2799Right-handed alpha
Helix 132
AO6
A
2801 2819Right-handed alpha
Helix 133
AO7
A
2825 2847Right-handed alpha
Helix 134
AO8
A
2851 2862Right-handed alpha
Helix 135
AO9
A
2863 2865Right-handed 310
Helix 136
AP1
A
2875 2883Right-handed alpha
Helix 137
AP2
A
2885 2898Right-handed alpha
Helix 138
AP3
A
2920 2931Right-handed alpha
Helix 139
AP4
A
2935 2941Right-handed alpha
Helix 140
AP5
A
2952 2958Right-handed alpha
Helix 141
AP6
A
2966 2977Right-handed alpha
Helix 142
AP7
A
2990 3004Right-handed alpha
Helix 143
AP8
A
3011 3017Right-handed alpha
Helix 144
AP9
A
3027 3032Right-handed alpha
Helix 145
AQ1
A
3034 3039Right-handed alpha
Helix 146
AQ2
A
3039 3053Right-handed alpha
Helix 147
AQ3
A
3060 3069Right-handed alpha
Helix 148
AQ4
A
3083 3093Right-handed alpha
Helix 149
AQ5
A
3095 3117Right-handed alpha
Helix 150
AQ6
A
3123 3130Right-handed alpha
Helix 151
AQ7
A
3131 3146Right-handed alpha
Helix 152
AQ8
A
3154 3167Right-handed alpha
Helix 153
AQ9
A
3175 3197Right-handed alpha
Helix 154
AR1
A
3227 3249Right-handed alpha
Helix 155
AR2
A
3251 3262Right-handed alpha
Helix 156
AR3
A
3264 3268Right-handed 310
Helix 157
AR4
A
3270 3290Right-handed alpha
Helix 158
AR5
A
3294 3309Right-handed alpha
Helix 159
AR6
A
3319 3341Right-handed alpha
Helix 160
AR7
A
3353 3360Right-handed alpha
Helix 161
AR8
A
3373 3391Right-handed alpha
Helix 162
AR9
A
3409 3428Right-handed alpha
Helix 163
AS1
A
3441 3456Right-handed alpha
Helix 164
AS2
A
3461 3464Right-handed 310
Helix 165
AS3
A
3465 3475Right-handed alpha
Helix 166
AS4
A
3479 3488Right-handed alpha
Helix 167
AS5
A
3495 3497Right-handed 310
Helix 168
AS6
A
3498 3504Right-handed alpha
Helix 169
AS7
A
3515 3525Right-handed alpha
Helix 170
AS8
A
3526 3528Right-handed 310
Helix 171
AS9
A
3529 3537Right-handed alpha
Helix 172
AT1
A
3545 3562Right-handed alpha
Helix 173
AT2
A
3567 3577Right-handed alpha
Helix 174
AT3
A
3580 3597Right-handed alpha
Helix 175
AT4
A
3604 3616Right-handed alpha
Helix 176
AT5
A
3621 3627Right-handed alpha
Helix 177
AT6
A
3632 3640Right-handed alpha
Helix 178
AT7
A
3640 3651Right-handed alpha
Helix 179
AT8
A
3660 3671Right-handed alpha
Helix 180
AT9
A
3686 3690Right-handed 310
Helix 181
AU1
A
3760 3775Right-handed alpha
Helix 182
AU2
A
3779 3785Right-handed alpha
Helix 183
AU3
A
3812 3820Right-handed alpha
Helix 184
AU4
A
3821 3830Right-handed alpha
Helix 185
AU5
A
3836 3846Right-handed alpha
Helix 186
AU6
A
3853 3859Right-handed alpha
Helix 187
AU7
A
3863 3876Right-handed alpha
Helix 188
AU8
A
3881 3891Right-handed alpha
Helix 189
AU9
A
3895 3915Right-handed alpha
Helix 190
AV1
A
3924 3927Right-handed 310
Helix 191
AV2
A
3964 3971Right-handed alpha
Helix 192
AV3
A
3979 3992Right-handed alpha
Helix 193
AV4
A
3996 4007Right-handed alpha
Helix 194
AV5
A
4013 4023Right-handed alpha
Helix 195
AV6
A
4040 4052Right-handed alpha
Helix 196
AV7
A
4055 4066Right-handed alpha
Helix 197
AV8
A
4074 4081Right-handed alpha
Helix 198
AV9
A
4099 4112Right-handed alpha
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There are 5 sheets in PDB entry 7K19. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
583 584first strand
Strand 2
A
613 614anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
893 895first strand
Strand 2
A
904 906anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3719 3721first strand
Strand 2
A
3741 3742anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3727 3728first strand
Strand 2
A
3736 3738anti-parallel
Strand 3
A
3750 3754anti-parallel
Strand 4
A
3800 3804anti-parallel
Strand 5
A
3793 3797anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3809 3811first strand
Strand 2
A
3929 3931anti-parallel
Strand 3
A
3936 3938anti-parallel
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