Analysis of interatomic Contacts of Structural Units in PDB entry:
7K1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7K1V entry

There is 1 chain in PDB entry 7K1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 18ASN 663
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 7K1V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 28Right-handed alpha
Helix 2
AA2
A
29 36Right-handed alpha
Helix 3
AA3
A
48 69Right-handed alpha
Helix 4
AA4
A
84 89Right-handed alpha
Helix 5
AA5
A
89 95Right-handed alpha
Helix 6
AA6
A
97 111Right-handed alpha
Helix 7
AA7
A
113 127Right-handed alpha
Helix 8
AA8
A
161 166Right-handed alpha
Helix 9
AA9
A
170 174Right-handed 310
Helix 10
AB1
A
175 179Right-handed 310
Helix 11
AB2
A
193 210Right-handed alpha
Helix 12
AB3
A
215 221Right-handed alpha
Helix 13
AB4
A
231 238Right-handed alpha
Helix 14
AB5
A
244 251Right-handed alpha
Helix 15
AB6
A
267 278Right-handed alpha
Helix 16
AB7
A
279 295Right-handed alpha
Helix 17
AB8
A
300 302Right-handed 310
Helix 18
AB9
A
303 312Right-handed alpha
Helix 19
AC1
A
323 328Right-handed alpha
Helix 20
AC2
A
328 336Right-handed alpha
Helix 21
AC3
A
340 349Right-handed alpha
Helix 22
AC4
A
352 372Right-handed alpha
Helix 23
AC5
A
379 389Right-handed alpha
Helix 24
AC6
A
416 437Right-handed alpha
Helix 25
AC7
A
479 499Right-handed alpha
Helix 26
AC8
A
500 506Right-handed alpha
Helix 27
AC9
A
517 528Right-handed alpha
Helix 28
AD1
A
528 534Right-handed alpha
Helix 29
AD2
A
535 537Right-handed 310
Helix 30
AD3
A
558 572Right-handed alpha
Helix 31
AD4
A
573 580Right-handed alpha
Helix 32
AD5
A
591 602Right-handed alpha
Helix 33
AD6
A
610 616Right-handed alpha
Helix 34
AD7
A
617 620Right-handed 310
Helix 35
AD8
A
624 629Right-handed alpha
Helix 36
AD9
A
630 634Right-handed 310
Helix 37
AE1
A
637 644Right-handed alpha
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There are 3 sheets in PDB entry 7K1V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
607 608anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 151first strand
Strand 2
A
259 262parallel
Strand 3
A
228 230anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
454 455first strand
Strand 2
A
462 463anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il