Analysis of interatomic Contacts of Structural Units in PDB entry:
7K34


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7K34 entry

There are 6 chains in PDB entry 7K34 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 233
A
 THR 235ARG 440
B
 SER 0HIS 233
B
 THR 235ARG 440
C
 SER -1HIS 233
C
 THR 235PRO 414
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 91 helices in PDB entry 7K34. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 29Right-handed alpha
Helix 2
AA2
A
40 46Right-handed alpha
Helix 3
AA3
A
47 48Right-handed 310
Helix 4
AA4
A
49 54Right-handed 310
Helix 5
AA5
A
74 92Right-handed alpha
Helix 6
AA6
A
102 115Right-handed alpha
Helix 7
AA7
A
125 129Right-handed 310
Helix 8
AA8
A
131 142Right-handed alpha
Helix 9
AA9
A
158 169Right-handed alpha
Helix 10
AB1
A
188 195Right-handed alpha
Helix 11
AB2
A
208 214Right-handed alpha
Helix 12
AB3
A
219 223Right-handed 310
Helix 13
AB4
A
253 262Right-handed alpha
Helix 14
AB5
A
270 272Right-handed 310
Helix 15
AB6
A
273 309Right-handed alpha
Helix 16
AB7
A
315 319Right-handed 310
Helix 17
AB8
A
332 343Right-handed alpha
Helix 18
AB9
A
369 375Right-handed alpha
Helix 19
AC1
A
378 394Right-handed alpha
Helix 20
AC2
A
398 410Right-handed alpha
Helix 21
AC3
A
411 413Right-handed 310
Helix 22
AC4
A
422 426Right-handed 310
Helix 23
AC5
A
427 439Right-handed alpha
Helix 24
AC6
B
1 29Right-handed alpha
Helix 25
AC7
B
40 45Right-handed alpha
Helix 26
AC8
B
49 54Right-handed 310
Helix 27
AC9
B
74 92Right-handed alpha
Helix 28
AD1
B
102 115Right-handed alpha
Helix 29
AD2
B
125 129Right-handed 310
Helix 30
AD3
B
131 142Right-handed alpha
Helix 31
AD4
B
158 169Right-handed alpha
Helix 32
AD5
B
187 195Right-handed alpha
Helix 33
AD6
B
208 214Right-handed alpha
Helix 34
AD7
B
253 262Right-handed alpha
Helix 35
AD8
B
270 272Right-handed 310
Helix 36
AD9
B
273 309Right-handed alpha
Helix 37
AE1
B
315 319Right-handed 310
Helix 38
AE2
B
332 343Right-handed alpha
Helix 39
AE3
B
344 347Right-handed 310
Helix 40
AE4
B
369 375Right-handed alpha
Helix 41
AE5
B
378 394Right-handed alpha
Helix 42
AE6
B
398 410Right-handed alpha
Helix 43
AE7
B
411 413Right-handed 310
Helix 44
AE8
B
422 426Right-handed 310
Helix 45
AE9
B
427 439Right-handed alpha
Helix 46
AF1
C
0 29Right-handed alpha
Helix 47
AF2
C
40 46Right-handed alpha
Helix 48
AF3
C
47 48Right-handed 310
Helix 49
AF4
C
49 54Right-handed 310
Helix 50
AF5
C
74 92Right-handed alpha
Helix 51
AF6
C
102 115Right-handed alpha
Helix 52
AF7
C
125 129Right-handed 310
Helix 53
AF8
C
131 142Right-handed alpha
Helix 54
AF9
C
158 169Right-handed alpha
Helix 55
AG1
C
187 195Right-handed alpha
Helix 56
AG2
C
208 214Right-handed alpha
Helix 57
AG3
C
219 223Right-handed 310
Helix 58
AG4
C
253 262Right-handed alpha
Helix 59
AG5
C
270 272Right-handed 310
Helix 60
AG6
C
273 309Right-handed alpha
Helix 61
AG7
C
315 319Right-handed 310
Helix 62
AG8
C
332 343Right-handed alpha
Helix 63
AG9
C
369 375Right-handed alpha
Helix 64
AH1
C
378 394Right-handed alpha
Helix 65
AH2
C
398 410Right-handed alpha
Helix 66
AH3
C
411 413Right-handed 310
Helix 67
AH4
C
422 426Right-handed 310
Helix 68
AH5
C
427 439Right-handed alpha
Helix 69
AH6
D
1 29Right-handed alpha
Helix 70
AH7
D
40 45Right-handed alpha
Helix 71
AH8
D
46 48Right-handed 310
Helix 72
AH9
D
49 54Right-handed 310
Helix 73
AI1
D
74 92Right-handed alpha
Helix 74
AI2
D
102 115Right-handed alpha
Helix 75
AI3
D
125 129Right-handed 310
Helix 76
AI4
D
131 142Right-handed alpha
Helix 77
AI5
D
158 168Right-handed alpha
Helix 78
AI6
D
187 195Right-handed alpha
Helix 79
AI7
D
208 214Right-handed alpha
Helix 80
AI8
D
219 223Right-handed 310
Helix 81
AI9
D
253 262Right-handed alpha
Helix 82
AJ1
D
270 272Right-handed 310
Helix 83
AJ2
D
273 309Right-handed alpha
Helix 84
AJ3
D
315 319Right-handed 310
Helix 85
AJ4
D
332 343Right-handed alpha
Helix 86
AJ5
D
369 375Right-handed alpha
Helix 87
AJ6
D
378 394Right-handed alpha
Helix 88
AJ7
D
398 410Right-handed alpha
Helix 89
AJ8
D
411 413Right-handed 310
Helix 90
AJ9
D
422 426Right-handed 310
Helix 91
AK1
D
427 439Right-handed alpha
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There are 12 sheets in PDB entry 7K34. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 31first strand
Strand 2
A
349 350parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 97first strand
Strand 2
A
242 246anti-parallel
Strand 3
A
227 231anti-parallel
Strand 4
A
200 204parallel
Strand 5
A
172 177parallel
Strand 6
A
120 123parallel
Strand 7
A
144 147parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 313first strand
Strand 2
A
325 331anti-parallel
Strand 3
A
363 368anti-parallel
Strand 4
A
352 355anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 31first strand
Strand 2
B
349 350parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 97first strand
Strand 2
B
242 246anti-parallel
Strand 3
B
227 231anti-parallel
Strand 4
B
200 204parallel
Strand 5
B
172 177parallel
Strand 6
B
120 123parallel
Strand 7
B
144 147parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
312 313first strand
Strand 2
B
325 331anti-parallel
Strand 3
B
363 368anti-parallel
Strand 4
B
352 355anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 31first strand
Strand 2
C
349 350parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
95 97first strand
Strand 2
C
242 246anti-parallel
Strand 3
C
227 231anti-parallel
Strand 4
C
200 204parallel
Strand 5
C
172 177parallel
Strand 6
C
120 123parallel
Strand 7
C
144 147parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
312 313first strand
Strand 2
C
325 331anti-parallel
Strand 3
C
363 368anti-parallel
Strand 4
C
352 355anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 31first strand
Strand 2
D
349 350parallel
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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
95 97first strand
Strand 2
D
242 246anti-parallel
Strand 3
D
227 231anti-parallel
Strand 4
D
200 204parallel
Strand 5
D
172 177parallel
Strand 6
D
120 123parallel
Strand 7
D
144 147parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
312 313first strand
Strand 2
D
325 331anti-parallel
Strand 3
D
363 368anti-parallel
Strand 4
D
352 355anti-parallel
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