Analysis of interatomic Contacts of Structural Units in PDB entry:
7K36


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7K36 entry

There are 9 chains in PDB entry 7K36 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 11SER 587
B
 THR 385VAL 713
C
 ASP 2ARG 294
D
 GLN 62LEU 135
E
 GLN 62GLN 127
F
 GLN 62TYR 123
G
 GLN 62LEU 121
H
 ARG 12ILE 210
I
 GLU 69GLU 824
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 89 helices in PDB entry 7K36. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 21Right-handed alpha
Helix 2
AA2
A
24 34Right-handed alpha
Helix 3
AA3
A
34 42Right-handed alpha
Helix 4
AA4
A
43 58Right-handed alpha
Helix 5
AA5
A
62 74Right-handed alpha
Helix 6
AA6
A
82 84Right-handed 310
Helix 7
AA7
A
85 98Right-handed alpha
Helix 8
AA8
A
101 116Right-handed alpha
Helix 9
AA9
A
122 139Right-handed alpha
Helix 10
AB1
A
141 155Right-handed alpha
Helix 11
AB2
A
156 159Right-handed 310
Helix 12
AB3
A
162 175Right-handed alpha
Helix 13
AB4
A
178 193Right-handed alpha
Helix 14
AB5
A
197 214Right-handed alpha
Helix 15
AB6
A
217 234Right-handed alpha
Helix 16
AB7
A
240 253Right-handed alpha
Helix 17
AB8
A
258 272Right-handed alpha
Helix 18
AB9
A
282 291Right-handed alpha
Helix 19
AC1
A
298 317Right-handed alpha
Helix 20
AC2
A
318 335Right-handed alpha
Helix 21
AC3
A
342 353Right-handed alpha
Helix 22
AC4
A
354 356Right-handed 310
Helix 23
AC5
A
359 375Right-handed alpha
Helix 24
AC6
A
377 395Right-handed alpha
Helix 25
AC7
A
400 412Right-handed alpha
Helix 26
AC8
A
416 434Right-handed alpha
Helix 27
AC9
A
435 441Right-handed alpha
Helix 28
AD1
A
442 452Right-handed alpha
Helix 29
AD2
A
455 490Right-handed alpha
Helix 30
AD3
A
495 513Right-handed alpha
Helix 31
AD4
A
513 529Right-handed alpha
Helix 32
AD5
A
533 548Right-handed alpha
Helix 33
AD6
A
552 569Right-handed alpha
Helix 34
AD7
A
572 587Right-handed alpha
Helix 35
AD8
B
490 492Right-handed 310
Helix 36
AD9
C
3 18Right-handed alpha
Helix 37
AE1
C
24 40Right-handed alpha
Helix 38
AE2
C
61 73Right-handed alpha
Helix 39
AE3
C
92 107Right-handed alpha
Helix 40
AE4
C
116 119Right-handed 310
Helix 41
AE5
C
120 128Right-handed alpha
Helix 42
AE6
C
128 138Right-handed alpha
Helix 43
AE7
C
140 151Right-handed alpha
Helix 44
AE8
C
176 182Right-handed alpha
Helix 45
AE9
C
194 199Right-handed alpha
Helix 46
AF1
C
221 233Right-handed alpha
Helix 47
AF2
D
64 135Right-handed alpha
Helix 48
AF3
E
64 127Right-handed alpha
Helix 49
AF4
F
64 123Right-handed alpha
Helix 50
AF5
G
64 121Right-handed alpha
Helix 51
AF6
H
20 25Right-handed alpha
Helix 52
AF7
H
37 50Right-handed alpha
Helix 53
AF8
H
53 59Right-handed alpha
Helix 54
AF9
H
66 92Right-handed alpha
Helix 55
AG1
H
120 137Right-handed alpha
Helix 56
AG2
H
152 174Right-handed alpha
Helix 57
AG3
H
174 185Right-handed alpha
Helix 58
AG4
H
186 199Right-handed alpha
Helix 59
AG5
I
77 84Right-handed alpha
Helix 60
AG6
I
92 109Right-handed alpha
Helix 61
AG7
I
118 133Right-handed alpha
Helix 62
AG8
I
137 154Right-handed alpha
Helix 63
AG9
I
161 180Right-handed alpha
Helix 64
AH1
I
180 194Right-handed alpha
Helix 65
AH2
I
210 213Right-handed 310
Helix 66
AH3
I
214 233Right-handed alpha
Helix 67
AH4
I
241 253Right-handed alpha
Helix 68
AH5
I
261 275Right-handed alpha
Helix 69
AH6
I
282 299Right-handed alpha
Helix 70
AH7
I
300 315Right-handed alpha
Helix 71
AH8
I
323 330Right-handed alpha
Helix 72
AH9
I
429 445Right-handed alpha
Helix 73
AI1
I
460 473Right-handed alpha
Helix 74
AI2
I
477 492Right-handed alpha
Helix 75
AI3
I
504 514Right-handed alpha
Helix 76
AI4
I
516 532Right-handed alpha
Helix 77
AI5
I
543 548Right-handed 310
Helix 78
AI6
I
557 593Right-handed alpha
Helix 79
AI7
I
593 607Right-handed alpha
Helix 80
AI8
I
608 617Right-handed alpha
Helix 81
AI9
I
620 627Right-handed alpha
Helix 82
AJ1
I
661 679Right-handed alpha
Helix 83
AJ2
I
682 692Right-handed alpha
Helix 84
AJ3
I
694 702Right-handed alpha
Helix 85
AJ4
I
706 721Right-handed alpha
Helix 86
AJ5
I
724 732Right-handed alpha
Helix 87
AJ6
I
733 743Right-handed alpha
Helix 88
AJ7
I
763 784Right-handed alpha
Helix 89
AJ8
I
814 823Right-handed alpha
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There are 9 sheets in PDB entry 7K36. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
387 392first strand
Strand 2
B
709 713anti-parallel
Strand 3
B
700 703anti-parallel
Strand 4
B
690 693anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
401 404first strand
Strand 2
B
410 414anti-parallel
Strand 3
B
420 424anti-parallel
Strand 4
B
443 444anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
454 457first strand
Strand 2
B
463 467anti-parallel
Strand 3
B
472 477anti-parallel
Strand 4
B
494 499anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
505 510first strand
Strand 2
B
517 521anti-parallel
Strand 3
B
526 529anti-parallel
Strand 4
B
539 541anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
553 555first strand
Strand 2
B
563 566anti-parallel
Strand 3
B
572 575anti-parallel
Strand 4
B
584 586anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
600 605first strand
Strand 2
B
611 616anti-parallel
Strand 3
B
620 625anti-parallel
Strand 4
B
633 636anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
642 647first strand
Strand 2
B
653 658anti-parallel
Strand 3
B
663 667anti-parallel
Strand 4
B
675 677anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
45 48first strand
Strand 2
C
156 159parallel
Strand 3
C
163 165anti-parallel
Strand 4
C
236 239parallel
Strand 5
C
256 259parallel
Strand 6
C
248 251anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
111 114first strand
Strand 2
C
80 83parallel
Strand 3
C
52 55parallel
Strand 4
C
273 278anti-parallel
Strand 5
C
284 289anti-parallel
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