Analysis of interatomic Contacts of Structural Units in PDB entry:
7K44


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7K44 entry

There is 1 chain in PDB entry 7K44 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 6ILE 361
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 7K44. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
139 143Right-handed 310
Helix 2
AA2
A
182 184Right-handed 310
Helix 3
AA3
A
255 257Right-handed 310
Helix 4
AA4
A
284 288Right-handed 310
Helix 5
AA5
A
315 317Right-handed 310
Helix 6
AA6
A
322 329Right-handed alpha
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There are 7 sheets in PDB entry 7K44. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 15first strand
Strand 2
A
24 30anti-parallel
Strand 3
A
67 71anti-parallel
Strand 4
A
60 61anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 56first strand
Strand 2
A
35 41anti-parallel
Strand 3
A
79 86anti-parallel
Strand 4
A
90 96anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 107first strand
Strand 2
A
117 123anti-parallel
Strand 3
A
151 155anti-parallel
Strand 4
A
144 145anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 137first strand
Strand 2
A
128 133anti-parallel
Strand 3
A
164 170anti-parallel
Strand 4
A
173 180anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 188first strand
Strand 2
A
347 360anti-parallel
Strand 3
A
219 227anti-parallel
Strand 4
A
202 206anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 188first strand
Strand 2
A
347 360anti-parallel
Strand 3
A
259 267anti-parallel
Strand 4
A
307 313anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 198first strand
Strand 2
A
231 240anti-parallel
Strand 3
A
333 340anti-parallel
Strand 4
A
276 281anti-parallel
Strand 5
A
289 292anti-parallel
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