Analysis of interatomic Contacts of Structural Units in PDB entry:
7K65


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7K65 entry

There are 2 chains in PDB entry 7K65 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 46VAL 1170
B
 GLN 1THR 115
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 7K65. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
60 83Right-handed alpha
Helix 2
AA2
A
85 100Right-handed alpha
Helix 3
AA3
A
101 104Right-handed 310
Helix 4
AA4
A
110 115Right-handed alpha
Helix 5
AA5
A
120 133Right-handed alpha
Helix 6
AA6
A
157 173Right-handed alpha
Helix 7
AA7
A
186 188Right-handed 310
Helix 8
AA8
A
201 210Right-handed alpha
Helix 9
AA9
A
216 228Right-handed 310
Helix 10
AB1
A
241 245Right-handed 310
Helix 11
AB2
A
246 257Right-handed alpha
Helix 12
AB3
A
261 272Right-handed alpha
Helix 13
AB4
A
304 310Right-handed alpha
Helix 14
AB5
A
324 328Right-handed 310
Helix 15
AB6
A
354 363Right-handed alpha
Helix 16
AB7
A
365 369Right-handed 310
Helix 17
AB8
A
374 396Right-handed alpha
Helix 18
AB9
A
411 421Right-handed alpha
Helix 19
AC1
A
424 444Right-handed alpha
Helix 20
AC2
A
452 478Right-handed alpha
Helix 21
AC3
A
483 488Right-handed alpha
Helix 22
AC4
A
488 513Right-handed alpha
Helix 23
AC5
A
518 520Right-handed 310
Helix 24
AC6
A
521 549Right-handed alpha
Helix 25
AC7
A
553 577Right-handed alpha
Helix 26
AC8
A
577 588Right-handed alpha
Helix 27
AC9
A
717 726Right-handed alpha
Helix 28
AD1
A
727 732Right-handed alpha
Helix 29
AD2
A
732 754Right-handed alpha
Helix 30
AD3
A
762 766Right-handed 310
Helix 31
AD4
A
771 784Right-handed alpha
Helix 32
AD5
A
797 800Right-handed 310
Helix 33
AD6
A
801 812Right-handed alpha
Helix 34
AD7
A
813 815Right-handed 310
Helix 35
AD8
A
829 851Right-handed alpha
Helix 36
AD9
A
863 874Right-handed alpha
Helix 37
AE1
A
885 890Right-handed 310
Helix 38
AE2
A
904 916Right-handed alpha
Helix 39
AE3
A
916 924Right-handed alpha
Helix 40
AE4
A
942 947Right-handed alpha
Helix 41
AE5
A
970 989Right-handed alpha
Helix 42
AE6
A
998 1002Right-handed 310
Helix 43
AE7
A
1005 1008Right-handed 310
Helix 44
AE8
A
1009 1034Right-handed alpha
Helix 45
AE9
A
1035 1061Right-handed alpha
Helix 46
AF1
A
1065 1079Right-handed alpha
Helix 47
AF2
A
1080 1082Right-handed 310
Helix 48
AF3
A
1083 1092Right-handed alpha
Helix 49
AF4
A
1096 1125Right-handed alpha
Helix 50
AF5
A
1126 1129Right-handed 310
Helix 51
AF6
A
1131 1138Right-handed alpha
Helix 52
AF7
A
1138 1154Right-handed alpha
Helix 53
AF8
A
1155 1164Right-handed alpha
Helix 54
AF9
B
61 64Right-handed 310
Helix 55
AG1
B
86 90Right-handed 310
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There are 7 sheets in PDB entry 7K65. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 215first strand
Strand 2
A
346 352anti-parallel
Strand 3
A
140 148anti-parallel
Strand 4
A
403 408anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 178first strand
Strand 2
A
181 184anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 334first strand
Strand 2
A
340 343anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
958 964first strand
Strand 2
A
787 793anti-parallel
Strand 3
A
994 997anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 7first strand
Strand 2
B
18 23anti-parallel
Strand 3
B
77 82anti-parallel
Strand 4
B
67 72anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 59first strand
Strand 2
B
46 51anti-parallel
Strand 3
B
33 39anti-parallel
Strand 4
B
91 98anti-parallel
Strand 5
B
107 108anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 59first strand
Strand 2
B
46 51anti-parallel
Strand 3
B
33 39anti-parallel
Strand 4
B
91 98anti-parallel
Strand 5
B
112 114anti-parallel
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