Analysis of interatomic Contacts of Structural Units in PDB entry:
7K7M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7K7M entry

There are 2 chains in PDB entry 7K7M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 756
B
 MET 1PRO 757
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 7K7M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 12Right-handed alpha
Helix 2
AA2
A
12 33Right-handed alpha
Helix 3
AA3
A
34 36Right-handed 310
Helix 4
AA4
A
48 61Right-handed alpha
Helix 5
AA5
A
83 101Right-handed alpha
Helix 6
AA6
A
119 124Right-handed alpha
Helix 7
AA7
A
143 160Right-handed alpha
Helix 8
AA8
A
170 179Right-handed alpha
Helix 9
AA9
A
180 193Right-handed alpha
Helix 10
AB1
A
193 202Right-handed alpha
Helix 11
AB2
A
207 233Right-handed alpha
Helix 12
AB3
A
241 249Right-handed alpha
Helix 13
AB4
A
249 272Right-handed alpha
Helix 14
AB5
A
274 284Right-handed alpha
Helix 15
AB6
A
286 300Right-handed alpha
Helix 16
AB7
A
301 305Right-handed 310
Helix 17
AB8
A
309 333Right-handed alpha
Helix 18
AB9
A
333 342Right-handed alpha
Helix 19
AC1
A
343 347Right-handed 310
Helix 20
AC2
A
348 354Right-handed alpha
Helix 21
AC3
A
361 377Right-handed alpha
Helix 22
AC4
A
377 400Right-handed alpha
Helix 23
AC5
A
400 416Right-handed alpha
Helix 24
AC6
A
417 422Right-handed 310
Helix 25
AC7
A
428 432Right-handed 310
Helix 26
AC8
A
436 449Right-handed alpha
Helix 27
AC9
A
470 482Right-handed alpha
Helix 28
AD1
A
493 497Right-handed 310
Helix 29
AD2
A
522 524Right-handed 310
Helix 30
AD3
A
525 535Right-handed alpha
Helix 31
AD4
A
548 584Right-handed alpha
Helix 32
AD5
A
586 613Right-handed alpha
Helix 33
AD6
A
629 659Right-handed alpha
Helix 34
AD7
A
663 676Right-handed alpha
Helix 35
AD8
A
677 695Right-handed alpha
Helix 36
AD9
A
698 717Right-handed alpha
Helix 37
AE1
A
717 722Right-handed alpha
Helix 38
AE2
A
722 732Right-handed alpha
Helix 39
AE3
A
733 737Right-handed 310
Helix 40
AE4
A
739 748Right-handed alpha
Helix 41
AE5
B
2 12Right-handed alpha
Helix 42
AE6
B
12 33Right-handed alpha
Helix 43
AE7
B
34 38Right-handed 310
Helix 44
AE8
B
48 62Right-handed alpha
Helix 45
AE9
B
65 68Right-handed 310
Helix 46
AF1
B
83 101Right-handed alpha
Helix 47
AF2
B
119 124Right-handed alpha
Helix 48
AF3
B
143 159Right-handed alpha
Helix 49
AF4
B
170 179Right-handed alpha
Helix 50
AF5
B
179 190Right-handed alpha
Helix 51
AF6
B
192 204Right-handed alpha
Helix 52
AF7
B
207 234Right-handed alpha
Helix 53
AF8
B
241 249Right-handed alpha
Helix 54
AF9
B
249 271Right-handed alpha
Helix 55
AG1
B
274 285Right-handed alpha
Helix 56
AG2
B
285 302Right-handed alpha
Helix 57
AG3
B
303 307Right-handed 310
Helix 58
AG4
B
309 332Right-handed alpha
Helix 59
AG5
B
332 342Right-handed alpha
Helix 60
AG6
B
343 347Right-handed 310
Helix 61
AG7
B
351 356Right-handed alpha
Helix 62
AG8
B
362 374Right-handed alpha
Helix 63
AG9
B
377 382Right-handed alpha
Helix 64
AH1
B
384 400Right-handed alpha
Helix 65
AH2
B
400 415Right-handed alpha
Helix 66
AH3
B
416 422Right-handed 310
Helix 67
AH4
B
428 432Right-handed 310
Helix 68
AH5
B
436 449Right-handed alpha
Helix 69
AH6
B
470 483Right-handed alpha
Helix 70
AH7
B
525 535Right-handed alpha
Helix 71
AH8
B
548 584Right-handed alpha
Helix 72
AH9
B
586 612Right-handed alpha
Helix 73
AI1
B
616 621Right-handed alpha
Helix 74
AI2
B
629 659Right-handed alpha
Helix 75
AI3
B
663 694Right-handed alpha
Helix 76
AI4
B
698 716Right-handed alpha
Helix 77
AI5
B
717 722Right-handed alpha
Helix 78
AI6
B
722 730Right-handed alpha
Helix 79
AI7
B
731 737Right-handed 310
Helix 80
AI8
B
739 748Right-handed alpha
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There are 6 sheets in PDB entry 7K7M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 110first strand
Strand 2
A
133 136anti-parallel
Strand 3
A
70 73anti-parallel
Strand 4
A
166 169anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 425first strand
Strand 2
A
627 628parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
513 519first strand
Strand 2
A
456 462anti-parallel
Strand 3
A
546 547anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 110first strand
Strand 2
B
133 136anti-parallel
Strand 3
B
70 73anti-parallel
Strand 4
B
167 169anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
424 425first strand
Strand 2
B
627 628parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
499 500first strand
Strand 2
B
513 518anti-parallel
Strand 3
B
457 463anti-parallel
Strand 4
B
542 547anti-parallel
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