Analysis of interatomic Contacts of Structural Units in PDB entry:
7K7Y

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7K7Y entry

There are 8 chains in PDB entry 7K7Y (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	THR 831
D	GLY -1	SER 123
E	MET 1	THR 831
G	PRO 2	THR 831
B	PRO 2	THR 831
C	GLN 1	SER 123
F	GLN 1	VAL 120
H	GLN 1	SER 123

There are125 helices in PDB entry 7K7Y. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	56	Right-handed 310
Helix 2	AA2	A	76	96	Right-handed alpha
Helix 3	AA3	A	97	110	Right-handed alpha
Helix 4	AA4	A	172	176	Right-handed 310
Helix 5	AA5	A	205	222	Right-handed alpha
Helix 6	AA6	A	249	256	Right-handed alpha
Helix 7	AA7	A	257	263	Right-handed 310
Helix 8	AA8	A	264	287	Right-handed alpha
Helix 9	AA9	A	296	307	Right-handed alpha
Helix 10	AB1	A	320	334	Right-handed alpha
Helix 11	AB2	A	335	343	Right-handed alpha
Helix 12	AB3	A	377	388	Right-handed 310
Helix 13	AB4	A	392	394	Right-handed 310
Helix 14	AB5	A	432	434	Right-handed 310
Helix 15	AB6	A	439	443	Right-handed 310
Helix 16	AB7	A	445	450	Right-handed 310
Helix 17	AB8	A	518	525	Right-handed alpha
Helix 18	AB9	A	540	547	Right-handed alpha
Helix 19	AC1	A	556	564	Right-handed alpha
Helix 20	AC2	A	571	588	Right-handed alpha
Helix 21	AC3	A	605	611	Right-handed alpha
Helix 22	AC4	A	614	620	Right-handed alpha
Helix 23	AC5	A	620	629	Right-handed alpha
Helix 24	AC6	A	630	633	Right-handed 310
Helix 25	AC7	A	659	693	Right-handed alpha
Helix 26	AC8	A	693	722	Right-handed alpha
Helix 27	AC9	A	727	734	Right-handed alpha
Helix 28	AD1	A	739	800	Right-handed alpha
Helix 29	AD2	A	800	805	Right-handed alpha
Helix 30	AD3	A	806	820	Right-handed alpha
Helix 31	AD4	A	826	831	Right-handed alpha
Helix 32	AD5	D	87	91	Right-handed 310
Helix 33	AD6	E	51	56	Right-handed 310
Helix 34	AD7	E	76	96	Right-handed alpha
Helix 35	AD8	E	97	110	Right-handed alpha
Helix 36	AD9	E	172	176	Right-handed 310
Helix 37	AE1	E	205	222	Right-handed alpha
Helix 38	AE2	E	249	256	Right-handed alpha
Helix 39	AE3	E	257	263	Right-handed 310
Helix 40	AE4	E	264	287	Right-handed alpha
Helix 41	AE5	E	296	307	Right-handed alpha
Helix 42	AE6	E	320	334	Right-handed alpha
Helix 43	AE7	E	335	343	Right-handed alpha
Helix 44	AE8	E	377	388	Right-handed 310
Helix 45	AE9	E	392	394	Right-handed 310
Helix 46	AF1	E	432	434	Right-handed 310
Helix 47	AF2	E	439	443	Right-handed 310
Helix 48	AF3	E	445	450	Right-handed 310
Helix 49	AF4	E	518	526	Right-handed alpha
Helix 50	AF5	E	540	547	Right-handed alpha
Helix 51	AF6	E	556	564	Right-handed alpha
Helix 52	AF7	E	571	588	Right-handed alpha
Helix 53	AF8	E	605	611	Right-handed alpha
Helix 54	AF9	E	614	620	Right-handed alpha
Helix 55	AG1	E	620	629	Right-handed alpha
Helix 56	AG2	E	630	633	Right-handed 310
Helix 57	AG3	E	661	693	Right-handed alpha
Helix 58	AG4	E	693	722	Right-handed alpha
Helix 59	AG5	E	727	734	Right-handed alpha
Helix 60	AG6	E	739	800	Right-handed alpha
Helix 61	AG7	E	808	820	Right-handed alpha
Helix 62	AG8	E	826	831	Right-handed alpha
Helix 63	AG9	G	76	96	Right-handed alpha
Helix 64	AH1	G	97	110	Right-handed alpha
Helix 65	AH2	G	172	176	Right-handed 310
Helix 66	AH3	G	205	222	Right-handed alpha
Helix 67	AH4	G	249	256	Right-handed alpha
Helix 68	AH5	G	257	263	Right-handed 310
Helix 69	AH6	G	264	287	Right-handed alpha
Helix 70	AH7	G	292	307	Right-handed alpha
Helix 71	AH8	G	320	334	Right-handed alpha
Helix 72	AH9	G	335	343	Right-handed alpha
Helix 73	AI1	G	377	388	Right-handed 310
Helix 74	AI2	G	392	394	Right-handed 310
Helix 75	AI3	G	432	434	Right-handed 310
Helix 76	AI4	G	439	443	Right-handed 310
Helix 77	AI5	G	445	450	Right-handed 310
Helix 78	AI6	G	518	526	Right-handed alpha
Helix 79	AI7	G	540	547	Right-handed alpha
Helix 80	AI8	G	556	564	Right-handed alpha
Helix 81	AI9	G	571	588	Right-handed alpha
Helix 82	AJ1	G	605	611	Right-handed alpha
Helix 83	AJ2	G	614	620	Right-handed alpha
Helix 84	AJ3	G	620	629	Right-handed alpha
Helix 85	AJ4	G	630	634	Right-handed 310
Helix 86	AJ5	G	660	693	Right-handed alpha
Helix 87	AJ6	G	693	722	Right-handed alpha
Helix 88	AJ7	G	727	734	Right-handed alpha
Helix 89	AJ8	G	739	800	Right-handed alpha
Helix 90	AJ9	G	804	806	Right-handed 310
Helix 91	AK1	G	807	819	Right-handed alpha
Helix 92	AK2	G	826	831	Right-handed alpha
Helix 93	AK3	B	51	56	Right-handed 310
Helix 94	AK4	B	76	96	Right-handed alpha
Helix 95	AK5	B	97	110	Right-handed alpha
Helix 96	AK6	B	172	176	Right-handed 310
Helix 97	AK7	B	205	222	Right-handed alpha
Helix 98	AK8	B	249	256	Right-handed alpha
Helix 99	AK9	B	257	263	Right-handed 310
Helix 100	AL1	B	264	287	Right-handed alpha
Helix 101	AL2	B	292	307	Right-handed alpha
Helix 102	AL3	B	320	334	Right-handed alpha
Helix 103	AL4	B	335	343	Right-handed alpha
Helix 104	AL5	B	377	388	Right-handed 310
Helix 105	AL6	B	392	394	Right-handed 310
Helix 106	AL7	B	432	434	Right-handed 310
Helix 107	AL8	B	439	443	Right-handed 310
Helix 108	AL9	B	445	450	Right-handed 310
Helix 109	AM1	B	518	526	Right-handed alpha
Helix 110	AM2	B	540	547	Right-handed alpha
Helix 111	AM3	B	556	564	Right-handed alpha
Helix 112	AM4	B	571	588	Right-handed alpha
Helix 113	AM5	B	605	611	Right-handed alpha
Helix 114	AM6	B	614	620	Right-handed alpha
Helix 115	AM7	B	620	629	Right-handed alpha
Helix 116	AM8	B	630	633	Right-handed 310
Helix 117	AM9	B	660	693	Right-handed alpha
Helix 118	AN1	B	693	722	Right-handed alpha
Helix 119	AN2	B	727	734	Right-handed alpha
Helix 120	AN3	B	739	800	Right-handed alpha
Helix 121	AN4	B	807	819	Right-handed alpha
Helix 122	AN5	B	826	831	Right-handed alpha
Helix 123	AN6	C	87	91	Right-handed 310
Helix 124	AN7	F	87	91	Right-handed 310
Helix 125	AN8	H	87	91	Right-handed 310

There are 47 sheets in PDB entry 7K7Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	144	first strand
Strand 2	A	132	135	anti-parallel
Strand 3	A	18	22	anti-parallel
Strand 4	A	30	36	anti-parallel
Strand 5	A	39	42	anti-parallel
Strand 6	A	148	151	parallel
Strand 7	A	182	185	parallel
Strand 8	A	161	164	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	61	first strand
Strand 2	A	505	506	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	68	first strand
Strand 2	A	404	406	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	201	203	first strand
Strand 2	A	190	195	anti-parallel
Strand 3	A	356	360	anti-parallel
Strand 4	A	396	397	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	233	first strand
Strand 2	A	247	248	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	309	311	first strand
Strand 2	A	317	319	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	422	430	first strand
Strand 2	A	408	416	anti-parallel
Strand 3	A	510	513	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	453	454	first strand
Strand 2	A	649	650	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	536	538	first strand
Strand 2	A	550	552	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	7	first strand
Strand 2	D	18	23	anti-parallel
Strand 3	D	78	83	anti-parallel
Strand 4	D	68	73	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	60	first strand
Strand 2	D	45	51	anti-parallel
Strand 3	D	32	39	anti-parallel
Strand 4	D	93	100	anti-parallel
Strand 5	D	113	114	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	60	first strand
Strand 2	D	45	51	anti-parallel
Strand 3	D	32	39	anti-parallel
Strand 4	D	93	100	anti-parallel
Strand 5	D	118	119	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	141	144	first strand
Strand 2	E	132	135	anti-parallel
Strand 3	E	18	22	anti-parallel
Strand 4	E	30	36	anti-parallel
Strand 5	E	39	41	anti-parallel
Strand 6	E	148	151	parallel
Strand 7	E	182	185	parallel
Strand 8	E	161	164	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	60	61	first strand
Strand 2	E	505	506	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	66	68	first strand
Strand 2	E	404	406	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	201	203	first strand
Strand 2	E	190	195	anti-parallel
Strand 3	E	356	360	anti-parallel
Strand 4	E	396	397	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	232	233	first strand
Strand 2	E	247	248	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	309	311	first strand
Strand 2	E	317	319	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	422	430	first strand
Strand 2	E	408	416	anti-parallel
Strand 3	E	510	513	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	453	454	first strand
Strand 2	E	649	650	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	536	538	first strand
Strand 2	E	550	552	parallel

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There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	141	144	first strand
Strand 2	G	132	135	anti-parallel
Strand 3	G	18	22	anti-parallel
Strand 4	G	30	36	anti-parallel
Strand 5	G	39	41	anti-parallel
Strand 6	G	148	151	parallel
Strand 7	G	182	185	parallel
Strand 8	G	161	164	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	66	68	first strand
Strand 2	G	404	406	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	201	203	first strand
Strand 2	G	190	195	anti-parallel
Strand 3	G	356	360	anti-parallel
Strand 4	G	396	397	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	232	233	first strand
Strand 2	G	247	248	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	309	311	first strand
Strand 2	G	317	319	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	422	430	first strand
Strand 2	G	408	416	anti-parallel
Strand 3	G	510	513	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	453	454	first strand
Strand 2	G	649	650	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	536	538	first strand
Strand 2	G	550	552	parallel

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There are 8 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	141	144	first strand
Strand 2	B	132	135	anti-parallel
Strand 3	B	18	22	anti-parallel
Strand 4	B	30	36	anti-parallel
Strand 5	B	39	42	anti-parallel
Strand 6	B	148	151	parallel
Strand 7	B	182	185	parallel
Strand 8	B	161	164	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	61	first strand
Strand 2	B	505	506	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	68	first strand
Strand 2	B	404	406	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	201	203	first strand
Strand 2	B	190	195	anti-parallel
Strand 3	B	356	360	anti-parallel
Strand 4	B	396	397	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	232	233	first strand
Strand 2	B	247	248	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	309	311	first strand
Strand 2	B	317	319	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	422	430	first strand
Strand 2	B	408	416	anti-parallel
Strand 3	B	510	513	parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	453	454	first strand
Strand 2	B	649	650	parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	536	538	first strand
Strand 2	B	550	552	parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	7	first strand
Strand 2	C	18	23	anti-parallel
Strand 3	C	78	83	anti-parallel
Strand 4	C	68	73	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	60	first strand
Strand 2	C	45	51	anti-parallel
Strand 3	C	32	39	anti-parallel
Strand 4	C	93	100	anti-parallel
Strand 5	C	113	114	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	60	first strand
Strand 2	C	45	51	anti-parallel
Strand 3	C	32	39	anti-parallel
Strand 4	C	93	100	anti-parallel
Strand 5	C	118	119	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	7	first strand
Strand 2	F	18	23	anti-parallel
Strand 3	F	78	83	anti-parallel
Strand 4	F	69	73	anti-parallel

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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	60	first strand
Strand 2	F	46	51	anti-parallel
Strand 3	F	32	39	anti-parallel
Strand 4	F	93	100	anti-parallel
Strand 5	F	113	114	anti-parallel

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There are 5 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	60	first strand
Strand 2	F	46	51	anti-parallel
Strand 3	F	32	39	anti-parallel
Strand 4	F	93	100	anti-parallel
Strand 5	F	118	119	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	5	7	first strand
Strand 2	H	18	23	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	69	73	anti-parallel

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There are 5 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	58	60	first strand
Strand 2	H	45	51	anti-parallel
Strand 3	H	32	39	anti-parallel
Strand 4	H	92	100	anti-parallel
Strand 5	H	113	114	anti-parallel

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There are 5 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	58	60	first strand
Strand 2	H	45	51	anti-parallel
Strand 3	H	32	39	anti-parallel
Strand 4	H	92	100	anti-parallel
Strand 5	H	118	120	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7K7Y

Analysis of interatomic Contacts of Structural Units in PDB entry:
7K7Y