Analysis of interatomic Contacts of Structural Units in PDB entry:
7K8A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7K8A entry

There is 1 chain in PDB entry 7K8A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 761
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 7K8A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 12Right-handed alpha
Helix 2
AA2
A
12 31Right-handed alpha
Helix 3
AA3
A
34 36Right-handed 310
Helix 4
AA4
A
48 62Right-handed alpha
Helix 5
AA5
A
64 68Right-handed 310
Helix 6
AA6
A
83 101Right-handed alpha
Helix 7
AA7
A
119 124Right-handed alpha
Helix 8
AA8
A
143 160Right-handed alpha
Helix 9
AA9
A
170 206Right-handed alpha
Helix 10
AB1
A
207 233Right-handed alpha
Helix 11
AB2
A
241 271Right-handed alpha
Helix 12
AB3
A
274 286Right-handed alpha
Helix 13
AB4
A
286 302Right-handed alpha
Helix 14
AB5
A
303 307Right-handed 310
Helix 15
AB6
A
309 342Right-handed alpha
Helix 16
AB7
A
386 400Right-handed alpha
Helix 17
AB8
A
401 415Right-handed alpha
Helix 18
AB9
A
436 449Right-handed alpha
Helix 19
AC1
A
471 483Right-handed alpha
Helix 20
AC2
A
493 497Right-handed 310
Helix 21
AC3
A
525 534Right-handed alpha
Helix 22
AC4
A
548 563Right-handed alpha
Helix 23
AC5
A
563 583Right-handed alpha
Helix 24
AC6
A
586 612Right-handed alpha
Helix 25
AC7
A
616 621Right-handed alpha
Helix 26
AC8
A
630 660Right-handed alpha
Helix 27
AC9
A
663 692Right-handed alpha
Helix 28
AD1
A
698 722Right-handed alpha
Helix 29
AD2
A
723 732Right-handed alpha
Helix 30
AD3
A
733 737Right-handed 310
Helix 31
AD4
A
739 747Right-handed alpha
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There are 3 sheets in PDB entry 7K8A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 39first strand
Strand 2
A
238 239parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 110first strand
Strand 2
A
133 137anti-parallel
Strand 3
A
69 73anti-parallel
Strand 4
A
166 169anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
516 518first strand
Strand 2
A
457 460anti-parallel
Strand 3
A
545 546anti-parallel
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