Analysis of interatomic Contacts of Structural Units in PDB entry:
7K8B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7K8B entry

There is 1 chain in PDB entry 7K8B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 757
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7K8B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 10Right-handed alpha
Helix 2
AA2
A
13 37Right-handed alpha
Helix 3
AA3
A
48 62Right-handed alpha
Helix 4
AA4
A
84 101Right-handed alpha
Helix 5
AA5
A
110 114Right-handed 310
Helix 6
AA6
A
143 160Right-handed alpha
Helix 7
AA7
A
170 204Right-handed alpha
Helix 8
AA8
A
208 234Right-handed alpha
Helix 9
AA9
A
241 272Right-handed alpha
Helix 10
AB1
A
274 302Right-handed alpha
Helix 11
AB2
A
303 307Right-handed 310
Helix 12
AB3
A
309 342Right-handed alpha
Helix 13
AB4
A
343 348Right-handed alpha
Helix 14
AB5
A
383 400Right-handed alpha
Helix 15
AB6
A
405 417Right-handed alpha
Helix 16
AB7
A
418 422Right-handed 310
Helix 17
AB8
A
436 449Right-handed alpha
Helix 18
AB9
A
472 483Right-handed alpha
Helix 19
AC1
A
522 524Right-handed 310
Helix 20
AC2
A
525 535Right-handed alpha
Helix 21
AC3
A
549 581Right-handed alpha
Helix 22
AC4
A
586 612Right-handed alpha
Helix 23
AC5
A
616 621Right-handed alpha
Helix 24
AC6
A
628 659Right-handed alpha
Helix 25
AC7
A
663 695Right-handed alpha
Helix 26
AC8
A
698 718Right-handed alpha
Helix 27
AC9
A
718 723Right-handed alpha
Helix 28
AD1
A
723 731Right-handed alpha
Helix 29
AD2
A
732 736Right-handed 310
Helix 30
AD3
A
739 749Right-handed alpha
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There are 2 sheets in PDB entry 7K8B. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 137first strand
Strand 2
A
69 73anti-parallel
Strand 3
A
167 169anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 500first strand
Strand 2
A
515 518anti-parallel
Strand 3
A
457 460anti-parallel
Strand 4
A
547 548anti-parallel
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