Analysis of interatomic Contacts of Structural Units in PDB entry:
7KAZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KAZ entry

There are 3 chains in PDB entry 7KAZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 SER -1LEU 591
B
 SER -1LEU 591
A
 SER -1LEU 591
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 7KAZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
6 12Right-handed alpha
Helix 2
AA2
C
19 23Right-handed 310
Helix 3
AA3
C
31 44Right-handed alpha
Helix 4
AA4
C
48 50Right-handed 310
Helix 5
AA5
C
87 95Right-handed alpha
Helix 6
AA6
C
106 118Right-handed alpha
Helix 7
AA7
C
143 155Right-handed alpha
Helix 8
AA8
C
157 162Right-handed 310
Helix 9
AA9
C
165 170Right-handed alpha
Helix 10
AB1
C
171 177Right-handed alpha
Helix 11
AB2
C
177 188Right-handed alpha
Helix 12
AB3
C
194 205Right-handed alpha
Helix 13
AB4
C
206 212Right-handed 310
Helix 14
AB5
C
224 229Right-handed alpha
Helix 15
AB6
C
229 240Right-handed alpha
Helix 16
AB7
C
313 324Right-handed alpha
Helix 17
AB8
C
326 331Right-handed 310
Helix 18
AB9
C
332 337Right-handed alpha
Helix 19
AC1
C
354 366Right-handed alpha
Helix 20
AC2
C
368 372Right-handed 310
Helix 21
AC3
C
426 430Right-handed 310
Helix 22
AC4
C
431 444Right-handed alpha
Helix 23
AC5
C
446 457Right-handed alpha
Helix 24
AC6
C
469 473Right-handed 310
Helix 25
AC7
C
507 524Right-handed alpha
Helix 26
AC8
C
534 537Right-handed 310
Helix 27
AC9
C
538 550Right-handed alpha
Helix 28
AD1
C
554 560Right-handed alpha
Helix 29
AD2
C
562 577Right-handed alpha
Helix 30
AD3
C
579 588Right-handed alpha
Helix 31
AD4
B
6 12Right-handed alpha
Helix 32
AD5
B
19 23Right-handed 310
Helix 33
AD6
B
31 44Right-handed alpha
Helix 34
AD7
B
48 50Right-handed 310
Helix 35
AD8
B
87 95Right-handed alpha
Helix 36
AD9
B
106 118Right-handed alpha
Helix 37
AE1
B
143 155Right-handed alpha
Helix 38
AE2
B
157 161Right-handed 310
Helix 39
AE3
B
165 170Right-handed alpha
Helix 40
AE4
B
171 176Right-handed alpha
Helix 41
AE5
B
177 188Right-handed alpha
Helix 42
AE6
B
194 205Right-handed alpha
Helix 43
AE7
B
206 212Right-handed 310
Helix 44
AE8
B
224 229Right-handed alpha
Helix 45
AE9
B
229 240Right-handed alpha
Helix 46
AF1
B
313 324Right-handed alpha
Helix 47
AF2
B
325 331Right-handed 310
Helix 48
AF3
B
332 337Right-handed alpha
Helix 49
AF4
B
354 366Right-handed alpha
Helix 50
AF5
B
426 430Right-handed 310
Helix 51
AF6
B
431 443Right-handed alpha
Helix 52
AF7
B
446 457Right-handed alpha
Helix 53
AF8
B
469 473Right-handed 310
Helix 54
AF9
B
507 524Right-handed alpha
Helix 55
AG1
B
534 537Right-handed 310
Helix 56
AG2
B
538 550Right-handed alpha
Helix 57
AG3
B
554 560Right-handed alpha
Helix 58
AG4
B
562 577Right-handed alpha
Helix 59
AG5
B
579 588Right-handed alpha
Helix 60
AG6
A
6 12Right-handed alpha
Helix 61
AG7
A
19 23Right-handed 310
Helix 62
AG8
A
31 44Right-handed alpha
Helix 63
AG9
A
48 50Right-handed 310
Helix 64
AH1
A
87 95Right-handed alpha
Helix 65
AH2
A
106 118Right-handed alpha
Helix 66
AH3
A
143 155Right-handed alpha
Helix 67
AH4
A
157 162Right-handed 310
Helix 68
AH5
A
165 169Right-handed 310
Helix 69
AH6
A
171 176Right-handed alpha
Helix 70
AH7
A
177 188Right-handed alpha
Helix 71
AH8
A
194 205Right-handed alpha
Helix 72
AH9
A
206 212Right-handed 310
Helix 73
AI1
A
224 229Right-handed alpha
Helix 74
AI2
A
229 240Right-handed alpha
Helix 75
AI3
A
313 324Right-handed alpha
Helix 76
AI4
A
325 331Right-handed 310
Helix 77
AI5
A
332 337Right-handed alpha
Helix 78
AI6
A
354 366Right-handed alpha
Helix 79
AI7
A
426 430Right-handed 310
Helix 80
AI8
A
431 444Right-handed alpha
Helix 81
AI9
A
446 456Right-handed alpha
Helix 82
AJ1
A
469 473Right-handed 310
Helix 83
AJ2
A
507 524Right-handed alpha
Helix 84
AJ3
A
534 537Right-handed 310
Helix 85
AJ4
A
538 550Right-handed alpha
Helix 86
AJ5
A
554 559Right-handed alpha
Helix 87
AJ6
A
564 576Right-handed alpha
Helix 88
AJ7
A
579 588Right-handed alpha
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There are 12 sheets in PDB entry 7KAZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 4first strand
Strand 2
C
529 530parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
243 245first strand
Strand 2
C
52 55parallel
Strand 3
C
24 28parallel
Strand 4
C
284 289parallel
Strand 5
C
491 494parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
132 133first strand
Strand 2
C
126 128anti-parallel
Strand 3
C
380 382parallel
Strand 4
C
389 392anti-parallel
Strand 5
C
407 413anti-parallel
Strand 6
C
346 352anti-parallel
Strand 7
C
459 464anti-parallel
Strand 8
C
298 299anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
248 257first strand
Strand 2
C
262 271anti-parallel
Strand 3
C
275 279anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 4first strand
Strand 2
B
529 530parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 245first strand
Strand 2
B
52 55parallel
Strand 3
B
24 28parallel
Strand 4
B
284 289parallel
Strand 5
B
491 494parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 133first strand
Strand 2
B
126 128anti-parallel
Strand 3
B
380 382parallel
Strand 4
B
389 392anti-parallel
Strand 5
B
407 413anti-parallel
Strand 6
B
346 352anti-parallel
Strand 7
B
458 464anti-parallel
Strand 8
B
298 299anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
248 257first strand
Strand 2
B
262 271anti-parallel
Strand 3
B
274 279anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 4first strand
Strand 2
A
529 530parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 245first strand
Strand 2
A
52 55parallel
Strand 3
A
24 28parallel
Strand 4
A
284 289parallel
Strand 5
A
491 494parallel
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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
126 128anti-parallel
Strand 3
A
380 382parallel
Strand 4
A
389 392anti-parallel
Strand 5
A
407 413anti-parallel
Strand 6
A
346 352anti-parallel
Strand 7
A
458 464anti-parallel
Strand 8
A
298 299anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 258first strand
Strand 2
A
261 271anti-parallel
Strand 3
A
274 279anti-parallel
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