Analysis of interatomic Contacts of Structural Units in PDB entry:
7KC5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KC5 entry

There are 2 chains in PDB entry 7KC5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 128ILE 309
C
 GLY 128ILE 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7KC5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
143 161Right-handed alpha
Helix 2
AA2
A
182 190Right-handed alpha
Helix 3
AA3
A
191 196Right-handed alpha
Helix 4
AA4
A
207 219Right-handed alpha
Helix 5
AA5
A
221 225Right-handed 310
Helix 6
AA6
A
248 252Right-handed 310
Helix 7
AA7
A
263 266Right-handed 310
Helix 8
AA8
A
267 273Right-handed alpha
Helix 9
AA9
A
274 278Right-handed 310
Helix 10
AB1
A
281 285Right-handed alpha
Helix 11
AB2
A
291 293Right-handed 310
Helix 12
AB3
A
294 304Right-handed alpha
Helix 13
AB4
C
143 161Right-handed alpha
Helix 14
AB5
C
182 189Right-handed alpha
Helix 15
AB6
C
191 196Right-handed alpha
Helix 16
AB7
C
207 219Right-handed alpha
Helix 17
AB8
C
221 225Right-handed 310
Helix 18
AB9
C
248 252Right-handed 310
Helix 19
AC1
C
263 266Right-handed 310
Helix 20
AC2
C
267 273Right-handed alpha
Helix 21
AC3
C
274 278Right-handed 310
Helix 22
AC4
C
281 285Right-handed alpha
Helix 23
AC5
C
293 304Right-handed alpha
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There are 2 sheets in PDB entry 7KC5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 181first strand
Strand 2
A
166 173anti-parallel
Strand 3
A
130 136parallel
Strand 4
A
231 238parallel
Strand 5
A
255 261parallel
Strand 6
A
286 289parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
177 181first strand
Strand 2
C
167 173anti-parallel
Strand 3
C
130 136parallel
Strand 4
C
231 238parallel
Strand 5
C
255 261parallel
Strand 6
C
286 289parallel
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