Analysis of interatomic Contacts of Structural Units in PDB entry:
7KCX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KCX entry

There is 1 chain in PDB entry 7KCX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 23GLN 383
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7KCX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 38Right-handed alpha
Helix 2
AA2
A
73 75Right-handed 310
Helix 3
AA3
A
76 91Right-handed alpha
Helix 4
AA4
A
103 110Right-handed alpha
Helix 5
AA5
A
128 138Right-handed alpha
Helix 6
AA6
A
140 152Right-handed alpha
Helix 7
AA7
A
154 169Right-handed alpha
Helix 8
AA8
A
184 191Right-handed 310
Helix 9
AA9
A
192 196Right-handed 310
Helix 10
AB1
A
204 219Right-handed alpha
Helix 11
AB2
A
221 227Right-handed alpha
Helix 12
AB3
A
295 314Right-handed alpha
Helix 13
AB4
A
348 352Right-handed 310
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There are 5 sheets in PDB entry 7KCX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 65first strand
Strand 2
A
51 56anti-parallel
Strand 3
A
279 288anti-parallel
Strand 4
A
267 276anti-parallel
Strand 5
A
255 263anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 101first strand
Strand 2
A
125 127anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 233first strand
Strand 2
A
236 237anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
315 321first strand
Strand 2
A
339 344anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 328first strand
Strand 2
A
331 335anti-parallel
Strand 3
A
379 382anti-parallel
Strand 4
A
360 364anti-parallel
Strand 5
A
353 357anti-parallel
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