Analysis of interatomic Contacts of Structural Units in PDB entry:
7KES


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KES entry

There are 2 chains in PDB entry 7KES (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3ALA 262
B
 SER 3ALA 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7KES. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 19Right-handed alpha
Helix 2
AA2
A
31 36Right-handed alpha
Helix 3
AA3
A
42 54Right-handed alpha
Helix 4
AA4
A
68 73Right-handed alpha
Helix 5
AA5
A
74 81Right-handed 310
Helix 6
AA6
A
92 95Right-handed 310
Helix 7
AA7
A
96 104Right-handed alpha
Helix 8
AA8
A
113 116Right-handed 310
Helix 9
AA9
A
124 130Right-handed alpha
Helix 10
AB1
A
142 150Right-handed alpha
Helix 11
AB2
A
160 164Right-handed 310
Helix 12
AB3
A
165 174Right-handed alpha
Helix 13
AB4
A
214 226Right-handed alpha
Helix 14
AB5
A
244 262Right-handed alpha
Helix 15
AB6
B
7 19Right-handed alpha
Helix 16
AB7
B
32 35Right-handed 310
Helix 17
AB8
B
42 54Right-handed alpha
Helix 18
AB9
B
68 73Right-handed alpha
Helix 19
AC1
B
74 81Right-handed 310
Helix 20
AC2
B
92 95Right-handed 310
Helix 21
AC3
B
96 104Right-handed alpha
Helix 22
AC4
B
113 116Right-handed 310
Helix 23
AC5
B
124 130Right-handed alpha
Helix 24
AC6
B
142 150Right-handed alpha
Helix 25
AC7
B
160 164Right-handed 310
Helix 26
AC8
B
165 174Right-handed alpha
Helix 27
AC9
B
214 226Right-handed alpha
Helix 28
AD1
B
244 262Right-handed alpha
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There are 4 sheets in PDB entry 7KES. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 110first strand
Strand 2
A
118 122anti-parallel
Strand 3
A
58 62anti-parallel
Strand 4
A
25 30parallel
Strand 5
A
153 157parallel
Strand 6
A
237 243anti-parallel
Strand 7
A
230 234anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 189first strand
Strand 2
A
194 202anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 110first strand
Strand 2
B
118 122anti-parallel
Strand 3
B
58 62anti-parallel
Strand 4
B
25 30parallel
Strand 5
B
153 157parallel
Strand 6
B
237 243anti-parallel
Strand 7
B
230 234anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 190first strand
Strand 2
B
193 202anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il