Analysis of interatomic Contacts of Structural Units in PDB entry:
7KF6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7KF6 entry

There is 1 chain in PDB entry 7KF6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 5	PRO 665

There are132 helices in PDB entry 7KF6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	11	Right-handed alpha
Helix 2	AA2	A	12	33	Right-handed alpha
Helix 3	AA3	A	57	65	Right-handed alpha
Helix 4	AA4	A	65	74	Right-handed alpha
Helix 5	AA5	A	102	112	Right-handed alpha
Helix 6	AA6	A	113	118	Right-handed 310
Helix 7	AA7	A	134	138	Right-handed 310
Helix 8	AA8	A	152	163	Right-handed alpha
Helix 9	AA9	A	164	169	Right-handed alpha
Helix 10	AB1	A	192	200	Right-handed alpha
Helix 11	AB2	A	203	211	Right-handed alpha
Helix 12	AB3	A	239	245	Right-handed alpha
Helix 13	AB4	A	258	261	Right-handed 310
Helix 14	AB5	A	297	312	Right-handed alpha
Helix 15	AB6	A	327	358	Right-handed alpha
Helix 16	AB7	A	361	368	Right-handed alpha
Helix 17	AB8	A	369	385	Right-handed alpha
Helix 18	AB9	A	389	422	Right-handed alpha
Helix 19	AC1	A	434	445	Right-handed alpha
Helix 20	AC2	A	446	460	Right-handed alpha
Helix 21	AC3	A	461	467	Right-handed alpha
Helix 22	AC4	A	469	495	Right-handed alpha
Helix 23	AC5	A	496	502	Right-handed alpha
Helix 24	AC6	A	517	534	Right-handed alpha
Helix 25	AC7	A	535	550	Right-handed alpha
Helix 26	AC8	A	550	556	Right-handed alpha
Helix 27	AC9	A	582	598	Right-handed alpha
Helix 28	AD1	A	632	636	Right-handed 310
Helix 29	AD2	A	641	653	Right-handed alpha
Helix 30	AD3	A	664	674	Right-handed alpha
Helix 31	AD4	A	689	707	Right-handed alpha
Helix 32	AD5	A	729	736	Right-handed alpha
Helix 33	AD6	A	739	753	Right-handed alpha
Helix 34	AD7	A	779	784	Right-handed alpha
Helix 35	AD8	A	835	848	Right-handed alpha
Helix 36	AD9	A	860	888	Right-handed alpha
Helix 37	AE1	A	893	913	Right-handed alpha
Helix 38	AE2	A	913	919	Right-handed alpha
Helix 39	AE3	A	923	953	Right-handed alpha
Helix 40	AE4	A	955	960	Right-handed alpha
Helix 41	AE5	A	968	978	Right-handed alpha
Helix 42	AE6	A	980	1000	Right-handed alpha
Helix 43	AE7	A	1005	1020	Right-handed alpha
Helix 44	AE8	A	1022	1037	Right-handed alpha
Helix 45	AE9	B	6	11	Right-handed alpha
Helix 46	AF1	B	12	33	Right-handed alpha
Helix 47	AF2	B	57	65	Right-handed alpha
Helix 48	AF3	B	65	74	Right-handed alpha
Helix 49	AF4	B	102	112	Right-handed alpha
Helix 50	AF5	B	113	118	Right-handed 310
Helix 51	AF6	B	134	138	Right-handed 310
Helix 52	AF7	B	152	163	Right-handed alpha
Helix 53	AF8	B	164	169	Right-handed alpha
Helix 54	AF9	B	192	200	Right-handed alpha
Helix 55	AG1	B	203	211	Right-handed alpha
Helix 56	AG2	B	239	245	Right-handed alpha
Helix 57	AG3	B	258	261	Right-handed 310
Helix 58	AG4	B	297	312	Right-handed alpha
Helix 59	AG5	B	327	358	Right-handed alpha
Helix 60	AG6	B	361	368	Right-handed alpha
Helix 61	AG7	B	369	385	Right-handed alpha
Helix 62	AG8	B	389	422	Right-handed alpha
Helix 63	AG9	B	434	445	Right-handed alpha
Helix 64	AH1	B	446	460	Right-handed alpha
Helix 65	AH2	B	461	467	Right-handed alpha
Helix 66	AH3	B	469	495	Right-handed alpha
Helix 67	AH4	B	496	502	Right-handed alpha
Helix 68	AH5	B	517	534	Right-handed alpha
Helix 69	AH6	B	535	550	Right-handed alpha
Helix 70	AH7	B	550	556	Right-handed alpha
Helix 71	AH8	B	582	598	Right-handed alpha
Helix 72	AH9	B	632	636	Right-handed 310
Helix 73	AI1	B	641	653	Right-handed alpha
Helix 74	AI2	B	664	674	Right-handed alpha
Helix 75	AI3	B	689	707	Right-handed alpha
Helix 76	AI4	B	729	736	Right-handed alpha
Helix 77	AI5	B	739	753	Right-handed alpha
Helix 78	AI6	B	779	784	Right-handed alpha
Helix 79	AI7	B	835	848	Right-handed alpha
Helix 80	AI8	B	860	888	Right-handed alpha
Helix 81	AI9	B	893	913	Right-handed alpha
Helix 82	AJ1	B	913	919	Right-handed alpha
Helix 83	AJ2	B	923	953	Right-handed alpha
Helix 84	AJ3	B	955	960	Right-handed alpha
Helix 85	AJ4	B	968	978	Right-handed alpha
Helix 86	AJ5	B	980	1000	Right-handed alpha
Helix 87	AJ6	B	1005	1020	Right-handed alpha
Helix 88	AJ7	B	1022	1037	Right-handed alpha
Helix 89	AJ8	C	6	11	Right-handed alpha
Helix 90	AJ9	C	12	33	Right-handed alpha
Helix 91	AK1	C	57	65	Right-handed alpha
Helix 92	AK2	C	65	74	Right-handed alpha
Helix 93	AK3	C	102	112	Right-handed alpha
Helix 94	AK4	C	113	118	Right-handed 310
Helix 95	AK5	C	134	138	Right-handed 310
Helix 96	AK6	C	152	163	Right-handed alpha
Helix 97	AK7	C	164	169	Right-handed alpha
Helix 98	AK8	C	192	200	Right-handed alpha
Helix 99	AK9	C	203	211	Right-handed alpha
Helix 100	AL1	C	239	245	Right-handed alpha
Helix 101	AL2	C	258	261	Right-handed 310
Helix 102	AL3	C	297	312	Right-handed alpha
Helix 103	AL4	C	327	358	Right-handed alpha
Helix 104	AL5	C	361	368	Right-handed alpha
Helix 105	AL6	C	369	385	Right-handed alpha
Helix 106	AL7	C	389	422	Right-handed alpha
Helix 107	AL8	C	434	445	Right-handed alpha
Helix 108	AL9	C	446	460	Right-handed alpha
Helix 109	AM1	C	461	467	Right-handed alpha
Helix 110	AM2	C	469	495	Right-handed alpha
Helix 111	AM3	C	496	502	Right-handed alpha
Helix 112	AM4	C	517	534	Right-handed alpha
Helix 113	AM5	C	535	550	Right-handed alpha
Helix 114	AM6	C	550	556	Right-handed alpha
Helix 115	AM7	C	582	598	Right-handed alpha
Helix 116	AM8	C	632	636	Right-handed 310
Helix 117	AM9	C	641	653	Right-handed alpha
Helix 118	AN1	C	664	674	Right-handed alpha
Helix 119	AN2	C	689	707	Right-handed alpha
Helix 120	AN3	C	729	736	Right-handed alpha
Helix 121	AN4	C	739	753	Right-handed alpha
Helix 122	AN5	C	779	784	Right-handed alpha
Helix 123	AN6	C	835	848	Right-handed alpha
Helix 124	AN7	C	860	888	Right-handed alpha
Helix 125	AN8	C	893	913	Right-handed alpha
Helix 126	AN9	C	913	919	Right-handed alpha
Helix 127	AO1	C	923	953	Right-handed alpha
Helix 128	AO2	C	955	960	Right-handed alpha
Helix 129	AO3	C	968	978	Right-handed alpha
Helix 130	AO4	C	980	1000	Right-handed alpha
Helix 131	AO5	C	1005	1020	Right-handed alpha
Helix 132	AO6	C	1022	1037	Right-handed alpha

There are 24 sheets in PDB entry 7KF6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	129	first strand
Strand 2	A	46	52	anti-parallel
Strand 3	A	90	97	anti-parallel
Strand 4	A	79	86	anti-parallel
Strand 5	A	813	816	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	181	first strand
Strand 2	A	285	291	anti-parallel
Strand 3	A	140	146	anti-parallel
Strand 4	A	319	326	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	263	269	first strand
Strand 2	A	185	191	anti-parallel
Strand 3	A	765	771	parallel
Strand 4	A	755	760	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	274	277	first strand
Strand 2	A	602	610	anti-parallel
Strand 3	A	624	630	anti-parallel
Strand 4	A	569	572	anti-parallel
Strand 5	A	662	663	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	575	576	first strand
Strand 2	A	658	659	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	821	826	first strand
Strand 2	A	681	687	anti-parallel
Strand 3	A	854	859	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	719	728	first strand
Strand 2	A	802	810	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	788	789	first strand
Strand 2	A	795	796	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	129	first strand
Strand 2	B	46	52	anti-parallel
Strand 3	B	90	97	anti-parallel
Strand 4	B	79	86	anti-parallel
Strand 5	B	813	816	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	174	181	first strand
Strand 2	B	285	291	anti-parallel
Strand 3	B	140	146	anti-parallel
Strand 4	B	319	326	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	263	269	first strand
Strand 2	B	185	191	anti-parallel
Strand 3	B	765	771	parallel
Strand 4	B	755	760	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	274	277	first strand
Strand 2	B	602	610	anti-parallel
Strand 3	B	624	630	anti-parallel
Strand 4	B	569	572	anti-parallel
Strand 5	B	662	663	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	575	576	first strand
Strand 2	B	658	659	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	821	826	first strand
Strand 2	B	681	687	anti-parallel
Strand 3	B	854	859	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	719	728	first strand
Strand 2	B	802	810	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	788	789	first strand
Strand 2	B	795	796	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	128	129	first strand
Strand 2	C	46	52	anti-parallel
Strand 3	C	90	97	anti-parallel
Strand 4	C	79	86	anti-parallel
Strand 5	C	813	816	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	174	181	first strand
Strand 2	C	285	291	anti-parallel
Strand 3	C	140	146	anti-parallel
Strand 4	C	319	326	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	263	269	first strand
Strand 2	C	185	191	anti-parallel
Strand 3	C	765	771	parallel
Strand 4	C	755	760	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	274	277	first strand
Strand 2	C	602	610	anti-parallel
Strand 3	C	624	630	anti-parallel
Strand 4	C	569	572	anti-parallel
Strand 5	C	662	663	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	575	576	first strand
Strand 2	C	658	659	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	821	826	first strand
Strand 2	C	681	687	anti-parallel
Strand 3	C	854	859	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	719	728	first strand
Strand 2	C	802	810	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	788	789	first strand
Strand 2	C	795	796	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7KF6

Analysis of interatomic Contacts of Structural Units in PDB entry:
7KF6