Analysis of interatomic Contacts of Structural Units in PDB entry:
7KFT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7KFT entry

There are 5 chains in PDB entry 7KFT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	MET 1	LEU 96
A	MET 1	LEU 90
D	GLN 650	LYS 981
C	MET 1	LEU 634
E	LYS 641	LYS 981

There are 56 helices in PDB entry 7KFT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	14	24	Right-handed alpha
Helix 2	AA2	B	41	57	Right-handed alpha
Helix 3	AA3	B	58	60	Right-handed 310
Helix 4	AA4	B	72	79	Right-handed alpha
Helix 5	AA5	A	12	25	Right-handed alpha
Helix 6	AA6	A	41	60	Right-handed alpha
Helix 7	AA7	D	699	709	Right-handed alpha
Helix 8	AA8	D	728	733	Right-handed alpha
Helix 9	AA9	D	739	746	Right-handed alpha
Helix 10	AB1	D	748	773	Right-handed alpha
Helix 11	AB2	D	777	794	Right-handed alpha
Helix 12	AB3	D	800	817	Right-handed alpha
Helix 13	AB4	D	818	822	Right-handed 310
Helix 14	AB5	D	839	863	Right-handed alpha
Helix 15	AB6	D	880	887	Right-handed alpha
Helix 16	AB7	D	891	904	Right-handed alpha
Helix 17	AB8	D	908	910	Right-handed 310
Helix 18	AB9	D	927	944	Right-handed alpha
Helix 19	AC1	D	950	969	Right-handed alpha
Helix 20	AC2	C	28	41	Right-handed alpha
Helix 21	AC3	C	45	49	Right-handed alpha
Helix 22	AC4	C	80	91	Right-handed alpha
Helix 23	AC5	C	136	150	Right-handed alpha
Helix 24	AC6	C	171	175	Right-handed 310
Helix 25	AC7	C	180	184	Right-handed 310
Helix 26	AC8	C	192	211	Right-handed alpha
Helix 27	AC9	C	223	231	Right-handed alpha
Helix 28	AD1	C	274	288	Right-handed alpha
Helix 29	AD2	C	325	331	Right-handed alpha
Helix 30	AD3	C	332	344	Right-handed alpha
Helix 31	AD4	C	345	347	Right-handed 310
Helix 32	AD5	C	352	370	Right-handed alpha
Helix 33	AD6	C	396	420	Right-handed alpha
Helix 34	AD7	C	430	445	Right-handed alpha
Helix 35	AD8	C	453	458	Right-handed 310
Helix 36	AD9	C	462	474	Right-handed alpha
Helix 37	AE1	C	478	488	Right-handed alpha
Helix 38	AE2	C	511	518	Right-handed alpha
Helix 39	AE3	C	520	523	Right-handed 310
Helix 40	AE4	C	524	530	Right-handed alpha
Helix 41	AE5	C	549	572	Right-handed alpha
Helix 42	AE6	C	583	587	Right-handed 310
Helix 43	AE7	C	620	628	Right-handed alpha
Helix 44	AE8	E	699	709	Right-handed alpha
Helix 45	AE9	E	736	746	Right-handed alpha
Helix 46	AF1	E	748	771	Right-handed alpha
Helix 47	AF2	E	772	773	Right-handed 310
Helix 48	AF3	E	774	780	Right-handed 310
Helix 49	AF4	E	781	796	Right-handed alpha
Helix 50	AF5	E	801	817	Right-handed alpha
Helix 51	AF6	E	824	828	Right-handed 310
Helix 52	AF7	E	839	864	Right-handed alpha
Helix 53	AF8	E	882	887	Right-handed alpha
Helix 54	AF9	E	896	904	Right-handed alpha
Helix 55	AG1	E	927	944	Right-handed alpha
Helix 56	AG2	E	951	968	Right-handed alpha

There are 11 sheets in PDB entry 7KFT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	39	first strand
Strand 2	B	2	8	anti-parallel
Strand 3	B	66	71	anti-parallel
Strand 4	A	80	81	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	80	81	first strand
Strand 2	A	66	70	anti-parallel
Strand 3	A	2	8	anti-parallel
Strand 4	A	34	39	anti-parallel
Strand 5	A	29	31	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	652	656	first strand
Strand 2	D	687	693	parallel
Strand 3	D	713	716	parallel
Strand 4	D	722	727	anti-parallel
Strand 5	E	722	727	anti-parallel
Strand 6	E	713	716	anti-parallel
Strand 7	E	687	693	parallel
Strand 8	E	652	656	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	677	683	first strand
Strand 2	D	669	674	anti-parallel
Strand 3	D	662	665	anti-parallel
Strand 4	D	697	698	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	912	916	first strand
Strand 2	D	922	926	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	53	first strand
Strand 2	C	67	74	anti-parallel
Strand 3	C	10	17	anti-parallel
Strand 4	C	116	119	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	235	244	first strand
Strand 2	C	260	268	anti-parallel
Strand 3	C	160	164	anti-parallel
Strand 4	C	300	303	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	391	394	first strand
Strand 2	C	377	381	anti-parallel
Strand 3	C	491	492	parallel
Strand 4	C	497	500	anti-parallel
Strand 5	C	577	580	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	533	538	first strand
Strand 2	C	541	546	anti-parallel
Strand 3	C	448	450	anti-parallel
Strand 4	C	632	633	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	677	683	first strand
Strand 2	E	669	674	anti-parallel
Strand 3	E	662	665	anti-parallel
Strand 4	E	697	698	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	912	916	first strand
Strand 2	E	922	926	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7KFT

Analysis of interatomic Contacts of Structural Units in PDB entry:
7KFT