Analysis of interatomic Contacts of Structural Units in PDB entry:
7KGI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7KGI entry

There are 3 chains in PDB entry 7KGI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	PHE 1027
B	MET 1	PHE 1027
C	MET 1	PHE 1027

There are127 helices in PDB entry 7KGI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	8	Right-handed alpha
Helix 2	AA2	A	8	27	Right-handed alpha
Helix 3	AA3	A	28	30	Right-handed 310
Helix 4	AA4	A	53	61	Right-handed alpha
Helix 5	AA5	A	61	70	Right-handed alpha
Helix 6	AA6	A	99	112	Right-handed alpha
Helix 7	AA7	A	119	126	Right-handed alpha
Helix 8	AA8	A	150	162	Right-handed alpha
Helix 9	AA9	A	162	168	Right-handed alpha
Helix 10	AB1	A	189	197	Right-handed alpha
Helix 11	AB2	A	199	211	Right-handed alpha
Helix 12	AB3	A	242	248	Right-handed alpha
Helix 13	AB4	A	262	265	Right-handed alpha
Helix 14	AB5	A	298	315	Right-handed alpha
Helix 15	AB6	A	329	360	Right-handed alpha
Helix 16	AB7	A	361	387	Right-handed alpha
Helix 17	AB8	A	392	423	Right-handed alpha
Helix 18	AB9	A	426	438	Right-handed alpha
Helix 19	AC1	A	438	454	Right-handed alpha
Helix 20	AC2	A	455	457	Right-handed 310
Helix 21	AC3	A	460	496	Right-handed alpha
Helix 22	AC4	A	509	534	Right-handed alpha
Helix 23	AC5	A	535	556	Right-handed alpha
Helix 24	AC6	A	580	597	Right-handed alpha
Helix 25	AC7	A	635	648	Right-handed alpha
Helix 26	AC8	A	683	701	Right-handed alpha
Helix 27	AC9	A	723	731	Right-handed alpha
Helix 28	AD1	A	733	745	Right-handed alpha
Helix 29	AD2	A	768	772	Right-handed 310
Helix 30	AD3	A	773	778	Right-handed alpha
Helix 31	AD4	A	791	795	Right-handed alpha
Helix 32	AD5	A	827	841	Right-handed alpha
Helix 33	AD6	A	852	859	Right-handed alpha
Helix 34	AD7	A	862	884	Right-handed alpha
Helix 35	AD8	A	887	894	Right-handed alpha
Helix 36	AD9	A	895	911	Right-handed alpha
Helix 37	AE1	A	915	946	Right-handed alpha
Helix 38	AE2	A	949	976	Right-handed alpha
Helix 39	AE3	A	976	982	Right-handed alpha
Helix 40	AE4	A	986	1027	Right-handed alpha
Helix 41	AE5	B	2	7	Right-handed alpha
Helix 42	AE6	B	8	25	Right-handed alpha
Helix 43	AE7	B	26	30	Right-handed 310
Helix 44	AE8	B	53	61	Right-handed alpha
Helix 45	AE9	B	61	67	Right-handed alpha
Helix 46	AF1	B	68	71	Right-handed 310
Helix 47	AF2	B	99	112	Right-handed alpha
Helix 48	AF3	B	113	115	Right-handed 310
Helix 49	AF4	B	119	126	Right-handed alpha
Helix 50	AF5	B	150	162	Right-handed alpha
Helix 51	AF6	B	162	168	Right-handed alpha
Helix 52	AF7	B	189	196	Right-handed alpha
Helix 53	AF8	B	199	211	Right-handed alpha
Helix 54	AF9	B	242	247	Right-handed alpha
Helix 55	AG1	B	262	265	Right-handed alpha
Helix 56	AG2	B	298	314	Right-handed alpha
Helix 57	AG3	B	315	317	Right-handed 310
Helix 58	AG4	B	329	360	Right-handed alpha
Helix 59	AG5	B	361	370	Right-handed alpha
Helix 60	AG6	B	370	387	Right-handed alpha
Helix 61	AG7	B	391	402	Right-handed alpha
Helix 62	AG8	B	406	423	Right-handed alpha
Helix 63	AG9	B	426	438	Right-handed alpha
Helix 64	AH1	B	438	454	Right-handed alpha
Helix 65	AH2	B	455	459	Right-handed 310
Helix 66	AH3	B	461	486	Right-handed alpha
Helix 67	AH4	B	487	496	Right-handed alpha
Helix 68	AH5	B	509	534	Right-handed alpha
Helix 69	AH6	B	534	556	Right-handed alpha
Helix 70	AH7	B	580	597	Right-handed alpha
Helix 71	AH8	B	636	650	Right-handed alpha
Helix 72	AH9	B	683	700	Right-handed alpha
Helix 73	AI1	B	723	730	Right-handed alpha
Helix 74	AI2	B	733	746	Right-handed alpha
Helix 75	AI3	B	768	772	Right-handed 310
Helix 76	AI4	B	773	779	Right-handed alpha
Helix 77	AI5	B	791	795	Right-handed alpha
Helix 78	AI6	B	827	841	Right-handed alpha
Helix 79	AI7	B	852	863	Right-handed alpha
Helix 80	AI8	B	863	884	Right-handed alpha
Helix 81	AI9	B	887	893	Right-handed alpha
Helix 82	AJ1	B	895	911	Right-handed alpha
Helix 83	AJ2	B	915	946	Right-handed alpha
Helix 84	AJ3	B	949	961	Right-handed alpha
Helix 85	AJ4	B	961	976	Right-handed alpha
Helix 86	AJ5	B	976	981	Right-handed alpha
Helix 87	AJ6	B	986	1027	Right-handed alpha
Helix 88	AJ7	C	2	8	Right-handed alpha
Helix 89	AJ8	C	8	27	Right-handed alpha
Helix 90	AJ9	C	28	30	Right-handed 310
Helix 91	AK1	C	53	61	Right-handed alpha
Helix 92	AK2	C	61	70	Right-handed alpha
Helix 93	AK3	C	99	112	Right-handed alpha
Helix 94	AK4	C	119	126	Right-handed alpha
Helix 95	AK5	C	150	162	Right-handed alpha
Helix 96	AK6	C	162	167	Right-handed alpha
Helix 97	AK7	C	189	196	Right-handed alpha
Helix 98	AK8	C	199	211	Right-handed alpha
Helix 99	AK9	C	242	248	Right-handed alpha
Helix 100	AL1	C	262	265	Right-handed alpha
Helix 101	AL2	C	298	316	Right-handed alpha
Helix 102	AL3	C	329	359	Right-handed alpha
Helix 103	AL4	C	361	387	Right-handed alpha
Helix 104	AL5	C	391	424	Right-handed alpha
Helix 105	AL6	C	426	453	Right-handed alpha
Helix 106	AL7	C	453	458	Right-handed alpha
Helix 107	AL8	C	461	486	Right-handed alpha
Helix 108	AL9	C	487	497	Right-handed alpha
Helix 109	AM1	C	509	534	Right-handed alpha
Helix 110	AM2	C	534	556	Right-handed alpha
Helix 111	AM3	C	580	598	Right-handed alpha
Helix 112	AM4	C	635	647	Right-handed alpha
Helix 113	AM5	C	683	700	Right-handed alpha
Helix 114	AM6	C	723	730	Right-handed alpha
Helix 115	AM7	C	733	746	Right-handed alpha
Helix 116	AM8	C	768	771	Right-handed 310
Helix 117	AM9	C	773	779	Right-handed alpha
Helix 118	AN1	C	793	795	Right-handed 310
Helix 119	AN2	C	827	841	Right-handed alpha
Helix 120	AN3	C	852	860	Right-handed alpha
Helix 121	AN4	C	862	884	Right-handed alpha
Helix 122	AN5	C	887	894	Right-handed alpha
Helix 123	AN6	C	895	911	Right-handed alpha
Helix 124	AN7	C	915	946	Right-handed alpha
Helix 125	AN8	C	949	976	Right-handed alpha
Helix 126	AN9	C	976	981	Right-handed alpha
Helix 127	AO1	C	986	1027	Right-handed alpha

There are 24 sheets in PDB entry 7KGI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	33	first strand
Strand 2	A	390	391	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	131	first strand
Strand 2	A	42	48	anti-parallel
Strand 3	A	87	94	anti-parallel
Strand 4	A	75	82	anti-parallel
Strand 5	A	807	810	anti-parallel
Strand 6	A	813	822	anti-parallel
Strand 7	A	672	677	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	131	first strand
Strand 2	A	42	48	anti-parallel
Strand 3	A	87	94	anti-parallel
Strand 4	A	75	82	anti-parallel
Strand 5	A	807	810	anti-parallel
Strand 6	A	813	822	anti-parallel
Strand 7	A	704	710	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	177	first strand
Strand 2	A	285	293	anti-parallel
Strand 3	A	138	143	anti-parallel
Strand 4	A	322	324	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	177	first strand
Strand 2	A	285	293	anti-parallel
Strand 3	A	278	280	anti-parallel
Strand 4	A	601	608	anti-parallel
Strand 5	A	619	626	anti-parallel
Strand 6	A	568	574	anti-parallel
Strand 7	A	654	658	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	272	first strand
Strand 2	A	182	188	anti-parallel
Strand 3	A	758	766	parallel
Strand 4	A	748	755	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	234	235	first strand
Strand 2	C	715	719	parallel
Strand 3	C	799	803	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	250	253	first strand
Strand 2	A	258	261	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	796	803	first strand
Strand 2	A	715	722	anti-parallel
Strand 3	B	234	235	parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	132	first strand
Strand 2	B	42	48	anti-parallel
Strand 3	B	87	94	anti-parallel
Strand 4	B	75	83	anti-parallel
Strand 5	B	806	810	anti-parallel
Strand 6	B	813	822	anti-parallel
Strand 7	B	704	709	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	132	first strand
Strand 2	B	42	48	anti-parallel
Strand 3	B	87	94	anti-parallel
Strand 4	B	75	83	anti-parallel
Strand 5	B	806	810	anti-parallel
Strand 6	B	813	822	anti-parallel
Strand 7	B	672	678	anti-parallel
Strand 8	B	846	851	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	177	first strand
Strand 2	B	285	293	anti-parallel
Strand 3	B	138	143	anti-parallel
Strand 4	B	322	328	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	177	first strand
Strand 2	B	285	293	anti-parallel
Strand 3	B	278	280	anti-parallel
Strand 4	B	601	610	anti-parallel
Strand 5	B	615	626	anti-parallel
Strand 6	B	568	574	anti-parallel
Strand 7	B	654	658	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	272	first strand
Strand 2	B	182	188	anti-parallel
Strand 3	B	758	766	parallel
Strand 4	B	748	755	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	250	252	first strand
Strand 2	B	259	261	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	796	797	first strand
Strand 2	B	714	722	anti-parallel
Strand 3	B	800	804	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	796	797	first strand
Strand 2	B	714	722	anti-parallel
Strand 3	C	232	236	parallel
Strand 4	C	217	219	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	128	131	first strand
Strand 2	C	42	48	anti-parallel
Strand 3	C	87	94	anti-parallel
Strand 4	C	75	83	anti-parallel
Strand 5	C	806	810	anti-parallel
Strand 6	C	813	822	anti-parallel
Strand 7	C	704	710	anti-parallel

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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	128	131	first strand
Strand 2	C	42	48	anti-parallel
Strand 3	C	87	94	anti-parallel
Strand 4	C	75	83	anti-parallel
Strand 5	C	806	810	anti-parallel
Strand 6	C	813	822	anti-parallel
Strand 7	C	672	678	anti-parallel
Strand 8	C	846	850	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	177	first strand
Strand 2	C	284	293	anti-parallel
Strand 3	C	138	143	anti-parallel
Strand 4	C	322	328	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	177	first strand
Strand 2	C	284	293	anti-parallel
Strand 3	C	278	281	anti-parallel
Strand 4	C	601	610	anti-parallel
Strand 5	C	615	626	anti-parallel
Strand 6	C	568	574	anti-parallel
Strand 7	C	654	658	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	266	272	first strand
Strand 2	C	182	188	anti-parallel
Strand 3	C	758	766	parallel
Strand 4	C	748	755	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	250	252	first strand
Strand 2	C	259	261	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	781	782	first strand
Strand 2	C	790	791	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7KGI

Analysis of interatomic Contacts of Structural Units in PDB entry:
7KGI