Analysis of interatomic Contacts of Structural Units in PDB entry:
7KGN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KGN entry

There is 1 chain in PDB entry 7KGN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 72GLU 609
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7KGN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
91 102Right-handed alpha
Helix 2
AA2
A
111 126Right-handed alpha
Helix 3
AA3
A
130 142Right-handed alpha
Helix 4
AA4
A
147 152Right-handed alpha
Helix 5
AA5
A
152 167Right-handed alpha
Helix 6
AA6
A
167 172Right-handed alpha
Helix 7
AA7
A
174 178Right-handed 310
Helix 8
AA8
A
188 199Right-handed alpha
Helix 9
AA9
A
205 212Right-handed 310
Helix 10
AB1
A
217 230Right-handed alpha
Helix 11
AB2
A
252 263Right-handed alpha
Helix 12
AB3
A
339 342Right-handed 310
Helix 13
AB4
A
343 348Right-handed alpha
Helix 14
AB5
A
349 359Right-handed alpha
Helix 15
AB6
A
363 367Right-handed 310
Helix 16
AB7
A
426 431Right-handed alpha
Helix 17
AB8
A
435 441Right-handed alpha
Helix 18
AB9
A
441 447Right-handed alpha
Helix 19
AC1
A
531 539Right-handed alpha
Helix 20
AC2
A
548 556Right-handed alpha
Helix 21
AC3
A
604 608Right-handed 310
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There are 4 sheets in PDB entry 7KGN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 392first strand
Strand 2
A
383 388anti-parallel
Strand 3
A
396 399anti-parallel
Strand 4
A
527 529anti-parallel
Strand 5
A
506 507parallel
Strand 6
A
495 496anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 392first strand
Strand 2
A
383 388anti-parallel
Strand 3
A
375 378anti-parallel
Strand 4
A
572 573parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
412 413first strand
Strand 2
A
569 570anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
416 418first strand
Strand 2
A
561 563anti-parallel
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