Analysis of interatomic Contacts of Structural Units in PDB entry:
7KH7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KH7 entry

There are 2 chains in PDB entry 7KH7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 2MET 324
B
THR 2PHE 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 7KH7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
28 36Right-handed alpha
Helix 2
AA2
A
50 58Right-handed alpha
Helix 3
AA3
A
65 73Right-handed alpha
Helix 4
AA4
A
84 93Right-handed alpha
Helix 5
AA5
A
108 113Right-handed alpha
Helix 6
AA6
A
132 143Right-handed alpha
Helix 7
AA7
A
161 171Right-handed alpha
Helix 8
AA8
A
182 197Right-handed alpha
Helix 9
AA9
A
199 215Right-handed alpha
Helix 10
AB1
A
219 228Right-handed alpha
Helix 11
AB2
A
230 250Right-handed alpha
Helix 12
AB3
A
251 266Right-handed alpha
Helix 13
AB4
A
267 284Right-handed alpha
Helix 14
AB5
A
284 296Right-handed alpha
Helix 15
AB6
A
298 310Right-handed alpha
Helix 16
AB7
A
311 322Right-handed alpha
Helix 17
AB8
B
26 39Right-handed alpha
Helix 18
AB9
B
50 59Right-handed alpha
Helix 19
AC1
B
65 73Right-handed alpha
Helix 20
AC2
B
81 93Right-handed alpha
Helix 21
AC3
B
94 97Right-handed 310
Helix 22
AC4
B
108 113Right-handed alpha
Helix 23
AC5
B
132 143Right-handed alpha
Helix 24
AC6
B
160 172Right-handed alpha
Helix 25
AC7
B
182 197Right-handed alpha
Helix 26
AC8
B
199 215Right-handed alpha
Helix 27
AC9
B
219 228Right-handed alpha
Helix 28
AD1
B
228 249Right-handed alpha
Helix 29
AD2
B
251 266Right-handed alpha
Helix 30
AD3
B
267 283Right-handed alpha
Helix 31
AD4
B
284 296Right-handed alpha
Helix 32
AD5
B
298 308Right-handed alpha
Helix 33
AD6
B
311 321Right-handed alpha
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There are 2 sheets in PDB entry 7KH7. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
63 64first strand
Strand 2
A
43 46parallel
Strand 3
A
20 23parallel
Strand 4
A
75 78parallel
Strand 5
A
102 105parallel
Strand 6
A
123 129parallel
Strand 7
A
148 152anti-parallel
Strand 8
A
178 180parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
4 5first strand
Strand 2
B
178 180anti-parallel
Strand 3
B
148 154parallel
Strand 4
B
123 129anti-parallel
Strand 5
B
102 105parallel
Strand 6
B
75 78parallel
Strand 7
B
19 23parallel
Strand 8
B
42 46parallel
Strand 9
B
62 64parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il