Analysis of interatomic Contacts of Structural Units in PDB entry:
7KHG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KHG entry

There is 1 chain in PDB entry 7KHG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 547SER 931
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 7KHG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
549 553Right-handed 310
Helix 2
AA2
A
572 576Right-handed 310
Helix 3
AA3
A
579 583Right-handed 310
Helix 4
AA4
A
630 648Right-handed alpha
Helix 5
AA5
A
678 685Right-handed alpha
Helix 6
AA6
A
686 689Right-handed 310
Helix 7
AA7
A
753 757Right-handed 310
Helix 8
AA8
A
759 763Right-handed 310
Helix 9
AA9
A
765 786Right-handed alpha
Helix 10
AB1
A
794 796Right-handed 310
Helix 11
AB2
A
811 815Right-handed 310
Helix 12
AB3
A
816 820Right-handed 310
Helix 13
AB4
A
832 836Right-handed 310
Helix 14
AB5
A
837 844Right-handed alpha
Helix 15
AB6
A
847 864Right-handed alpha
Helix 16
AB7
A
876 885Right-handed alpha
Helix 17
AB8
A
896 907Right-handed alpha
Helix 18
AB9
A
910 914Right-handed 310
Helix 19
AC1
A
916 930Right-handed alpha
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There are 4 sheets in PDB entry 7KHG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
568 570first strand
Strand 2
A
558 562anti-parallel
Strand 3
A
788 789anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
589 597first strand
Strand 2
A
601 609anti-parallel
Strand 3
A
617 625anti-parallel
Strand 4
A
667 671anti-parallel
Strand 5
A
656 660anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
676 677first strand
Strand 2
A
798 800anti-parallel
Strand 3
A
806 808anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
824 826first strand
Strand 2
A
829 831anti-parallel
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