Analysis of interatomic Contacts of Structural Units in PDB entry:
7KHN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KHN entry

There is 1 chain in PDB entry 7KHN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 50HIS 487
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7KHN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
62 75Right-handed alpha
Helix 2
AA2
A
113 124Right-handed alpha
Helix 3
AA3
A
151 167Right-handed alpha
Helix 4
AA4
A
169 174Right-handed alpha
Helix 5
AA5
A
183 190Right-handed alpha
Helix 6
AA6
A
193 199Right-handed alpha
Helix 7
AA7
A
204 220Right-handed alpha
Helix 8
AA8
A
227 238Right-handed alpha
Helix 9
AA9
A
241 248Right-handed alpha
Helix 10
AB1
A
256 270Right-handed alpha
Helix 11
AB2
A
309 316Right-handed 310
Helix 12
AB3
A
323 333Right-handed alpha
Helix 13
AB4
A
384 388Right-handed 310
Helix 14
AB5
A
392 402Right-handed alpha
Helix 15
AB6
A
434 436Right-handed 310
Helix 16
AB7
A
437 443Right-handed alpha
Helix 17
AB8
A
452 456Right-handed 310
Helix 18
AB9
A
462 481Right-handed alpha
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There are 5 sheets in PDB entry 7KHN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 274first strand
Strand 2
A
79 82parallel
Strand 3
A
54 59parallel
Strand 4
A
298 306parallel
Strand 5
A
288 293anti-parallel
Strand 6
A
279 285anti-parallel
Strand 7
A
317 319parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 274first strand
Strand 2
A
79 82parallel
Strand 3
A
54 59parallel
Strand 4
A
298 306parallel
Strand 5
A
448 450parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 97first strand
Strand 2
A
100 103anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 109first strand
Strand 2
A
252 254anti-parallel
Strand 3
A
127 129anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 150first strand
Strand 2
A
137 141anti-parallel
Strand 3
A
352 356parallel
Strand 4
A
364 371anti-parallel
Strand 5
A
375 382anti-parallel
Strand 6
A
339 345anti-parallel
Strand 7
A
409 415anti-parallel
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