Analysis of interatomic Contacts of Structural Units in PDB entry:
7KHV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7KHV entry

There are 6 chains in PDB entry 7KHV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 39	ILE 624
B	GLN 40	ILE 624
C	GLN 40	ILE 624
D	GLN 40	ILE 624
E	ASN 39	ILE 624
F	VAL 43	ILE 624

There are125 helices in PDB entry 7KHV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	75	89	Right-handed alpha
Helix 2	AA2	A	113	121	Right-handed alpha
Helix 3	AA3	A	148	163	Right-handed alpha
Helix 4	AA4	A	194	208	Right-handed alpha
Helix 5	AA5	A	232	249	Right-handed alpha
Helix 6	AA6	A	266	286	Right-handed alpha
Helix 7	AA7	A	303	318	Right-handed alpha
Helix 8	AA8	A	318	323	Right-handed alpha
Helix 9	AA9	A	336	340	Right-handed alpha
Helix 10	AB1	A	347	357	Right-handed alpha
Helix 11	AB2	A	376	388	Right-handed alpha
Helix 12	AB3	A	418	421	Right-handed 310
Helix 13	AB4	A	433	450	Right-handed alpha
Helix 14	AB5	A	455	469	Right-handed alpha
Helix 15	AB6	A	471	480	Right-handed alpha
Helix 16	AB7	A	498	514	Right-handed alpha
Helix 17	AB8	A	518	543	Right-handed alpha
Helix 18	AB9	A	544	577	Right-handed alpha
Helix 19	AC1	A	579	600	Right-handed alpha
Helix 20	AC2	A	608	619	Right-handed alpha
Helix 21	AC3	A	620	624	Right-handed 310
Helix 22	AC4	B	75	89	Right-handed alpha
Helix 23	AC5	B	113	121	Right-handed alpha
Helix 24	AC6	B	148	163	Right-handed alpha
Helix 25	AC7	B	194	208	Right-handed alpha
Helix 26	AC8	B	232	249	Right-handed alpha
Helix 27	AC9	B	266	286	Right-handed alpha
Helix 28	AD1	B	303	318	Right-handed alpha
Helix 29	AD2	B	318	323	Right-handed alpha
Helix 30	AD3	B	336	340	Right-handed alpha
Helix 31	AD4	B	347	357	Right-handed alpha
Helix 32	AD5	B	376	388	Right-handed alpha
Helix 33	AD6	B	418	421	Right-handed 310
Helix 34	AD7	B	433	450	Right-handed alpha
Helix 35	AD8	B	455	469	Right-handed alpha
Helix 36	AD9	B	471	480	Right-handed alpha
Helix 37	AE1	B	498	514	Right-handed alpha
Helix 38	AE2	B	518	543	Right-handed alpha
Helix 39	AE3	B	544	577	Right-handed alpha
Helix 40	AE4	B	579	600	Right-handed alpha
Helix 41	AE5	B	608	619	Right-handed alpha
Helix 42	AE6	B	620	624	Right-handed 310
Helix 43	AE7	C	75	89	Right-handed alpha
Helix 44	AE8	C	115	121	Right-handed alpha
Helix 45	AE9	C	148	163	Right-handed alpha
Helix 46	AF1	C	194	208	Right-handed alpha
Helix 47	AF2	C	232	249	Right-handed alpha
Helix 48	AF3	C	266	286	Right-handed alpha
Helix 49	AF4	C	303	318	Right-handed alpha
Helix 50	AF5	C	318	323	Right-handed alpha
Helix 51	AF6	C	336	340	Right-handed alpha
Helix 52	AF7	C	347	357	Right-handed alpha
Helix 53	AF8	C	376	388	Right-handed alpha
Helix 54	AF9	C	418	421	Right-handed 310
Helix 55	AG1	C	433	450	Right-handed alpha
Helix 56	AG2	C	455	469	Right-handed alpha
Helix 57	AG3	C	471	480	Right-handed alpha
Helix 58	AG4	C	498	514	Right-handed alpha
Helix 59	AG5	C	518	543	Right-handed alpha
Helix 60	AG6	C	544	577	Right-handed alpha
Helix 61	AG7	C	579	600	Right-handed alpha
Helix 62	AG8	C	608	619	Right-handed alpha
Helix 63	AG9	C	620	624	Right-handed 310
Helix 64	AH1	D	75	89	Right-handed alpha
Helix 65	AH2	D	113	121	Right-handed alpha
Helix 66	AH3	D	148	163	Right-handed alpha
Helix 67	AH4	D	194	208	Right-handed alpha
Helix 68	AH5	D	232	249	Right-handed alpha
Helix 69	AH6	D	266	286	Right-handed alpha
Helix 70	AH7	D	303	318	Right-handed alpha
Helix 71	AH8	D	318	323	Right-handed alpha
Helix 72	AH9	D	336	340	Right-handed alpha
Helix 73	AI1	D	347	357	Right-handed alpha
Helix 74	AI2	D	376	388	Right-handed alpha
Helix 75	AI3	D	418	421	Right-handed 310
Helix 76	AI4	D	437	450	Right-handed alpha
Helix 77	AI5	D	455	469	Right-handed alpha
Helix 78	AI6	D	471	480	Right-handed alpha
Helix 79	AI7	D	498	514	Right-handed alpha
Helix 80	AI8	D	518	543	Right-handed alpha
Helix 81	AI9	D	544	577	Right-handed alpha
Helix 82	AJ1	D	579	600	Right-handed alpha
Helix 83	AJ2	D	608	619	Right-handed alpha
Helix 84	AJ3	D	620	624	Right-handed 310
Helix 85	AJ4	E	75	89	Right-handed alpha
Helix 86	AJ5	E	113	121	Right-handed alpha
Helix 87	AJ6	E	148	163	Right-handed alpha
Helix 88	AJ7	E	194	208	Right-handed alpha
Helix 89	AJ8	E	232	249	Right-handed alpha
Helix 90	AJ9	E	266	286	Right-handed alpha
Helix 91	AK1	E	303	318	Right-handed alpha
Helix 92	AK2	E	318	323	Right-handed alpha
Helix 93	AK3	E	336	340	Right-handed alpha
Helix 94	AK4	E	347	357	Right-handed alpha
Helix 95	AK5	E	376	388	Right-handed alpha
Helix 96	AK6	E	418	421	Right-handed 310
Helix 97	AK7	E	433	450	Right-handed alpha
Helix 98	AK8	E	455	469	Right-handed alpha
Helix 99	AK9	E	471	480	Right-handed alpha
Helix 100	AL1	E	498	514	Right-handed alpha
Helix 101	AL2	E	518	543	Right-handed alpha
Helix 102	AL3	E	544	577	Right-handed alpha
Helix 103	AL4	E	579	600	Right-handed alpha
Helix 104	AL5	E	608	619	Right-handed alpha
Helix 105	AL6	E	620	624	Right-handed 310
Helix 106	AL7	F	75	89	Right-handed alpha
Helix 107	AL8	F	148	163	Right-handed alpha
Helix 108	AL9	F	194	208	Right-handed alpha
Helix 109	AM1	F	232	249	Right-handed alpha
Helix 110	AM2	F	266	286	Right-handed alpha
Helix 111	AM3	F	303	318	Right-handed alpha
Helix 112	AM4	F	318	323	Right-handed alpha
Helix 113	AM5	F	336	340	Right-handed alpha
Helix 114	AM6	F	347	357	Right-handed alpha
Helix 115	AM7	F	376	388	Right-handed alpha
Helix 116	AM8	F	418	421	Right-handed 310
Helix 117	AM9	F	433	450	Right-handed alpha
Helix 118	AN1	F	455	469	Right-handed alpha
Helix 119	AN2	F	471	480	Right-handed alpha
Helix 120	AN3	F	498	514	Right-handed alpha
Helix 121	AN4	F	518	543	Right-handed alpha
Helix 122	AN5	F	544	577	Right-handed alpha
Helix 123	AN6	F	579	600	Right-handed alpha
Helix 124	AN7	F	608	619	Right-handed alpha
Helix 125	AN8	F	620	624	Right-handed 310

There are 29 sheets in PDB entry 7KHV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	55	first strand
Strand 2	A	171	175	anti-parallel
Strand 3	A	133	138	anti-parallel
Strand 4	A	141	146	anti-parallel
Strand 5	A	102	108	parallel
Strand 6	A	65	69	parallel
Strand 7	A	92	93	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	61	first strand
Strand 2	A	167	168	anti-parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	186	first strand
Strand 2	A	212	215	parallel
Strand 3	A	252	257	parallel
Strand 4	A	291	295	parallel
Strand 5	A	329	331	parallel
Strand 6	A	362	365	parallel
Strand 7	A	391	395	parallel
Strand 8	A	423	428	parallel
Strand 9	A	181	186	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	341	342	first strand
Strand 2	A	345	346	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	485	486	first strand
Strand 2	A	492	493	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	55	first strand
Strand 2	B	171	175	anti-parallel
Strand 3	B	133	138	anti-parallel
Strand 4	B	141	146	anti-parallel
Strand 5	B	102	108	parallel
Strand 6	B	65	69	parallel
Strand 7	B	92	93	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	61	first strand
Strand 2	B	167	168	anti-parallel

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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	186	first strand
Strand 2	B	212	215	parallel
Strand 3	B	252	257	parallel
Strand 4	B	291	295	parallel
Strand 5	B	329	331	parallel
Strand 6	B	362	365	parallel
Strand 7	B	391	395	parallel
Strand 8	B	423	428	parallel
Strand 9	B	181	186	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	341	342	first strand
Strand 2	B	345	346	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	485	486	first strand
Strand 2	B	492	493	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	55	first strand
Strand 2	C	171	175	anti-parallel
Strand 3	C	133	138	anti-parallel
Strand 4	C	141	146	anti-parallel
Strand 5	C	102	108	parallel
Strand 6	C	65	69	parallel
Strand 7	C	92	93	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	61	first strand
Strand 2	C	167	168	anti-parallel

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There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	186	first strand
Strand 2	C	212	215	parallel
Strand 3	C	252	257	parallel
Strand 4	C	291	295	parallel
Strand 5	C	329	331	parallel
Strand 6	C	362	365	parallel
Strand 7	C	391	395	parallel
Strand 8	C	423	428	parallel
Strand 9	C	181	186	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	341	342	first strand
Strand 2	C	345	346	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	485	486	first strand
Strand 2	C	492	493	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	52	55	first strand
Strand 2	D	171	175	anti-parallel
Strand 3	D	133	137	anti-parallel
Strand 4	D	141	146	anti-parallel
Strand 5	D	102	108	parallel
Strand 6	D	65	69	parallel
Strand 7	D	92	93	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	60	61	first strand
Strand 2	D	167	168	anti-parallel

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There are 9 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	181	186	first strand
Strand 2	D	212	215	parallel
Strand 3	D	252	257	parallel
Strand 4	D	291	295	parallel
Strand 5	D	329	331	parallel
Strand 6	D	362	365	parallel
Strand 7	D	391	395	parallel
Strand 8	D	423	428	parallel
Strand 9	D	181	186	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	341	342	first strand
Strand 2	D	345	346	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	485	486	first strand
Strand 2	D	492	493	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	52	55	first strand
Strand 2	E	171	175	anti-parallel
Strand 3	E	133	138	anti-parallel
Strand 4	E	141	146	anti-parallel
Strand 5	E	102	108	parallel
Strand 6	E	65	69	parallel
Strand 7	E	92	93	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	60	61	first strand
Strand 2	E	167	168	anti-parallel

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There are 9 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	181	186	first strand
Strand 2	E	212	215	parallel
Strand 3	E	252	257	parallel
Strand 4	E	291	295	parallel
Strand 5	E	329	331	parallel
Strand 6	E	362	365	parallel
Strand 7	E	391	395	parallel
Strand 8	E	423	428	parallel
Strand 9	E	181	186	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	341	342	first strand
Strand 2	E	345	346	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	485	486	first strand
Strand 2	E	492	493	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	52	55	first strand
Strand 2	F	171	175	anti-parallel
Strand 3	F	133	135	anti-parallel
Strand 4	F	145	146	anti-parallel

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There are 9 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	181	186	first strand
Strand 2	F	212	215	parallel
Strand 3	F	252	257	parallel
Strand 4	F	291	295	parallel
Strand 5	F	329	331	parallel
Strand 6	F	362	365	parallel
Strand 7	F	391	395	parallel
Strand 8	F	423	428	parallel
Strand 9	F	181	186	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	341	342	first strand
Strand 2	F	345	346	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	485	486	first strand
Strand 2	F	492	493	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7KHV

Analysis of interatomic Contacts of Structural Units in PDB entry:
7KHV