Analysis of interatomic Contacts of Structural Units in PDB entry:
7KHY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KHY entry

There is 1 chain in PDB entry 7KHY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 25PRO 261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7KHY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 37Right-handed alpha
Helix 2
AA2
A
58 63Right-handed alpha
Helix 3
AA3
A
68 71Right-handed 310
Helix 4
AA4
A
72 83Right-handed alpha
Helix 5
AA5
A
102 106Right-handed 310
Helix 6
AA6
A
110 117Right-handed alpha
Helix 7
AA7
A
119 142Right-handed alpha
Helix 8
AA8
A
155 160Right-handed alpha
Helix 9
AA9
A
166 178Right-handed alpha
Helix 10
AB1
A
184 195Right-handed alpha
Helix 11
AB2
A
239 243Right-handed 310
Helix 12
AB3
A
244 257Right-handed alpha
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There are 2 sheets in PDB entry 7KHY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 27first strand
Strand 2
A
53 56parallel
Strand 3
A
42 48anti-parallel
Strand 4
A
228 236anti-parallel
Strand 5
A
215 223anti-parallel
Strand 6
A
204 211anti-parallel
Strand 7
A
196 199anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 66first strand
Strand 2
A
164 165anti-parallel
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