Analysis of interatomic Contacts of Structural Units in PDB entry:
7KIS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7KIS entry

There are 2 chains in PDB entry 7KIS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 60	VAL 622
B	PRO 63	PRO 621

There are 38 helices in PDB entry 7KIS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	169	174	Right-handed 310
Helix 2	AA2	A	186	191	Right-handed 310
Helix 3	AA3	A	206	211	Right-handed alpha
Helix 4	AA4	A	211	217	Right-handed alpha
Helix 5	AA5	A	252	264	Right-handed alpha
Helix 6	AA6	A	290	294	Right-handed 310
Helix 7	AA7	A	299	308	Right-handed alpha
Helix 8	AA8	A	316	321	Right-handed alpha
Helix 9	AA9	A	325	328	Right-handed 310
Helix 10	AB1	A	329	341	Right-handed alpha
Helix 11	AB2	A	376	383	Right-handed alpha
Helix 12	AB3	A	385	397	Right-handed alpha
Helix 13	AB4	A	397	408	Right-handed alpha
Helix 14	AB5	A	428	436	Right-handed alpha
Helix 15	AB6	A	442	450	Right-handed alpha
Helix 16	AB7	A	458	471	Right-handed alpha
Helix 17	AB8	A	503	519	Right-handed alpha
Helix 18	AB9	A	524	529	Right-handed alpha
Helix 19	AC1	A	594	608	Right-handed alpha
Helix 20	AC2	A	615	620	Right-handed alpha
Helix 21	AC3	B	169	174	Right-handed 310
Helix 22	AC4	B	205	211	Right-handed alpha
Helix 23	AC5	B	211	217	Right-handed alpha
Helix 24	AC6	B	252	264	Right-handed alpha
Helix 25	AC7	B	290	294	Right-handed 310
Helix 26	AC8	B	299	308	Right-handed alpha
Helix 27	AC9	B	325	328	Right-handed 310
Helix 28	AD1	B	329	341	Right-handed alpha
Helix 29	AD2	B	376	383	Right-handed alpha
Helix 30	AD3	B	385	397	Right-handed alpha
Helix 31	AD4	B	397	408	Right-handed alpha
Helix 32	AD5	B	428	436	Right-handed alpha
Helix 33	AD6	B	441	450	Right-handed alpha
Helix 34	AD7	B	458	472	Right-handed alpha
Helix 35	AD8	B	503	519	Right-handed alpha
Helix 36	AD9	B	524	529	Right-handed alpha
Helix 37	AE1	B	594	608	Right-handed alpha
Helix 38	AE2	B	615	620	Right-handed alpha

There are 11 sheets in PDB entry 7KIS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	64	first strand
Strand 2	A	220	222	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	163	166	first strand
Strand 2	A	78	84	anti-parallel
Strand 3	A	71	72	anti-parallel
Strand 4	A	247	249	parallel
Strand 5	A	481	484	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	179	182	first strand
Strand 2	A	201	205	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	280	286	first strand
Strand 2	A	268	273	anti-parallel
Strand 3	A	579	585	anti-parallel
Strand 4	A	566	572	anti-parallel
Strand 5	A	536	541	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	349	351	first strand
Strand 2	A	373	375	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	355	first strand
Strand 2	A	364	365	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	165	166	first strand
Strand 2	B	78	82	anti-parallel
Strand 3	B	71	72	anti-parallel
Strand 4	B	247	249	parallel
Strand 5	B	481	484	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	180	182	first strand
Strand 2	B	201	203	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	282	285	first strand
Strand 2	B	268	273	anti-parallel
Strand 3	B	579	585	anti-parallel
Strand 4	B	565	572	anti-parallel
Strand 5	B	536	542	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	349	351	first strand
Strand 2	B	373	375	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	355	first strand
Strand 2	B	364	365	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7KIS

Analysis of interatomic Contacts of Structural Units in PDB entry:
7KIS