Analysis of interatomic Contacts of Structural Units in PDB entry:
7KIY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KIY entry

There are 3 chains in PDB entry 7KIY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 56GLU 1360
B
 VAL 232GLN 915
C
 LYS 25ILE 715
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are115 helices in PDB entry 7KIY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
56 66Right-handed alpha
Helix 2
AA2
A
67 87Right-handed alpha
Helix 3
AA3
A
104 108Right-handed 310
Helix 4
AA4
A
129 147Right-handed alpha
Helix 5
AA5
A
154 181Right-handed alpha
Helix 6
AA6
A
184 198Right-handed alpha
Helix 7
AA7
A
210 226Right-handed alpha
Helix 8
AA8
A
233 238Right-handed alpha
Helix 9
AA9
A
260 274Right-handed alpha
Helix 10
AB1
A
277 282Right-handed alpha
Helix 11
AB2
A
285 301Right-handed alpha
Helix 12
AB3
A
301 307Right-handed alpha
Helix 13
AB4
A
315 320Right-handed alpha
Helix 14
AB5
A
325 333Right-handed alpha
Helix 15
AB6
A
346 351Right-handed alpha
Helix 16
AB7
A
352 354Right-handed 310
Helix 17
AB8
A
361 385Right-handed alpha
Helix 18
AB9
A
396 409Right-handed alpha
Helix 19
AC1
A
416 420Right-handed 310
Helix 20
AC2
A
447 459Right-handed alpha
Helix 21
AC3
A
460 462Right-handed 310
Helix 22
AC4
A
464 480Right-handed alpha
Helix 23
AC5
A
482 489Right-handed alpha
Helix 24
AC6
A
490 491Right-handed 310
Helix 25
AC7
A
492 503Right-handed 310
Helix 26
AC8
A
508 521Right-handed alpha
Helix 27
AC9
A
522 524Right-handed 310
Helix 28
AD1
A
542 555Right-handed alpha
Helix 29
AD2
A
563 574Right-handed alpha
Helix 30
AD3
A
587 599Right-handed alpha
Helix 31
AD4
A
602 614Right-handed alpha
Helix 32
AD5
A
616 620Right-handed 310
Helix 33
AD6
A
623 632Right-handed alpha
Helix 34
AD7
A
667 675Right-handed alpha
Helix 35
AD8
A
680 686Right-handed alpha
Helix 36
AD9
A
693 699Right-handed alpha
Helix 37
AE1
A
720 732Right-handed alpha
Helix 38
AE2
A
738 742Right-handed 310
Helix 39
AE3
A
747 758Right-handed alpha
Helix 40
AE4
A
765 786Right-handed alpha
Helix 41
AE5
A
787 795Right-handed alpha
Helix 42
AE6
A
805 819Right-handed alpha
Helix 43
AE7
A
877 893Right-handed alpha
Helix 44
AE8
A
900 916Right-handed alpha
Helix 45
AE9
A
946 961Right-handed alpha
Helix 46
AF1
A
961 977Right-handed alpha
Helix 47
AF2
A
981 987Right-handed alpha
Helix 48
AF3
A
998 1022Right-handed alpha
Helix 49
AF4
A
1029 1033Right-handed 310
Helix 50
AF5
A
1040 1056Right-handed alpha
Helix 51
AF6
A
1060 1071Right-handed alpha
Helix 52
AF7
A
1148 1164Right-handed alpha
Helix 53
AF8
A
1202 1224Right-handed alpha
Helix 54
AF9
A
1231 1235Right-handed 310
Helix 55
AG1
A
1240 1260Right-handed alpha
Helix 56
AG2
A
1267 1294Right-handed alpha
Helix 57
AG3
A
1310 1322Right-handed alpha
Helix 58
AG4
A
1323 1325Right-handed 310
Helix 59
AG5
A
1345 1350Right-handed 310
Helix 60
AG6
B
236 260Right-handed alpha
Helix 61
AG7
B
260 265Right-handed alpha
Helix 62
AG8
B
274 280Right-handed alpha
Helix 63
AG9
B
360 376Right-handed alpha
Helix 64
AH1
B
381 388Right-handed alpha
Helix 65
AH2
B
394 405Right-handed alpha
Helix 66
AH3
B
437 446Right-handed alpha
Helix 67
AH4
B
494 504Right-handed alpha
Helix 68
AH5
B
516 528Right-handed alpha
Helix 69
AH6
B
541 555Right-handed alpha
Helix 70
AH7
B
561 567Right-handed alpha
Helix 71
AH8
B
568 569Right-handed 310
Helix 72
AH9
B
570 572Right-handed 310
Helix 73
AI1
B
573 588Right-handed alpha
Helix 74
AI2
B
589 609Right-handed alpha
Helix 75
AI3
B
647 658Right-handed alpha
Helix 76
AI4
B
683 700Right-handed alpha
Helix 77
AI5
B
701 703Right-handed 310
Helix 78
AI6
B
715 727Right-handed alpha
Helix 79
AI7
B
739 755Right-handed alpha
Helix 80
AI8
B
781 798Right-handed alpha
Helix 81
AI9
B
810 829Right-handed alpha
Helix 82
AJ1
B
842 854Right-handed alpha
Helix 83
AJ2
B
859 870Right-handed alpha
Helix 84
AJ3
B
879 895Right-handed alpha
Helix 85
AJ4
B
897 915Right-handed alpha
Helix 86
AJ5
C
33 49Right-handed alpha
Helix 87
AJ6
C
66 77Right-handed alpha
Helix 88
AJ7
C
103 112Right-handed alpha
Helix 89
AJ8
C
116 135Right-handed alpha
Helix 90
AJ9
C
183 187Right-handed 310
Helix 91
AK1
C
195 203Right-handed alpha
Helix 92
AK2
C
210 222Right-handed alpha
Helix 93
AK3
C
239 244Right-handed alpha
Helix 94
AK4
C
250 259Right-handed alpha
Helix 95
AK5
C
274 284Right-handed alpha
Helix 96
AK6
C
289 298Right-handed alpha
Helix 97
AK7
C
371 377Right-handed alpha
Helix 98
AK8
C
379 382Right-handed 310
Helix 99
AK9
C
383 392Right-handed alpha
Helix 100
AL1
C
402 407Right-handed alpha
Helix 101
AL2
C
420 424Right-handed 310
Helix 102
AL3
C
433 454Right-handed alpha
Helix 103
AL4
C
471 492Right-handed alpha
Helix 104
AL5
C
503 514Right-handed alpha
Helix 105
AL6
C
515 518Right-handed 310
Helix 106
AL7
C
529 536Right-handed alpha
Helix 107
AL8
C
542 548Right-handed alpha
Helix 108
AL9
C
562 570Right-handed alpha
Helix 109
AM1
C
577 591Right-handed alpha
Helix 110
AM2
C
595 620Right-handed alpha
Helix 111
AM3
C
622 630Right-handed alpha
Helix 112
AM4
C
631 633Right-handed 310
Helix 113
AM5
C
635 651Right-handed alpha
Helix 114
AM6
C
655 666Right-handed alpha
Helix 115
AM7
C
672 690Right-handed alpha
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There are 3 sheets in PDB entry 7KIY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 112first strand
Strand 2
A
120 123anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
689 692first strand
Strand 2
A
871 873anti-parallel
Strand 3
A
824 825anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
148 150first strand
Strand 2
C
234 236anti-parallel
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