Analysis of interatomic Contacts of Structural Units in PDB entry:
7KJB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KJB entry

There is 1 chain in PDB entry 7KJB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 591LEU 965
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7KJB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
596 605Right-handed alpha
Helix 2
AA2
A
609 611Right-handed 310
Helix 3
AA3
A
653 668Right-handed alpha
Helix 4
AA4
A
700 707Right-handed alpha
Helix 5
AA5
A
712 733Right-handed alpha
Helix 6
AA6
A
741 743Right-handed 310
Helix 7
AA7
A
780 784Right-handed 310
Helix 8
AA8
A
785 792Right-handed alpha
Helix 9
AA9
A
795 812Right-handed alpha
Helix 10
AB1
A
822 833Right-handed alpha
Helix 11
AB2
A
843 854Right-handed alpha
Helix 12
AB3
A
857 861Right-handed 310
Helix 13
AB4
A
863 877Right-handed alpha
Helix 14
AB5
A
878 882Right-handed 310
Helix 15
AB6
A
910 916Right-handed alpha
Helix 16
AB7
A
918 920Right-handed 310
Helix 17
AB8
A
921 928Right-handed alpha
Helix 18
AB9
A
932 937Right-handed alpha
Helix 19
AC1
A
940 948Right-handed alpha
Helix 20
AC2
A
951 965Right-handed alpha
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There are 2 sheets in PDB entry 7KJB. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
613 621first strand
Strand 2
A
626 632anti-parallel
Strand 3
A
641 647anti-parallel
Strand 4
A
689 693anti-parallel
Strand 5
A
678 682anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
698 699first strand
Strand 2
A
745 747anti-parallel
Strand 3
A
753 755anti-parallel
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