Analysis of interatomic Contacts of Structural Units in PDB entry:
7KNG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KNG entry

There are 4 chains in PDB entry 7KNG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 20LYS 538
B
 ALA 20ILE 539
C
 ASP 2CYS 14
D
 ASP 2CYS 14
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 7KNG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 27Right-handed 310
Helix 2
AA2
A
48 53Right-handed alpha
Helix 3
AA3
A
55 62Right-handed alpha
Helix 4
AA4
A
72 77Right-handed 310
Helix 5
AA5
A
85 96Right-handed alpha
Helix 6
AA6
A
101 112Right-handed alpha
Helix 7
AA7
A
118 131Right-handed alpha
Helix 8
AA8
A
149 163Right-handed alpha
Helix 9
AA9
A
183 198Right-handed alpha
Helix 10
AB1
A
210 214Right-handed alpha
Helix 11
AB2
A
219 233Right-handed alpha
Helix 12
AB3
A
242 253Right-handed alpha
Helix 13
AB4
A
256 260Right-handed 310
Helix 14
AB5
A
266 271Right-handed 310
Helix 15
AB6
A
285 287Right-handed 310
Helix 16
AB7
A
288 297Right-handed alpha
Helix 17
AB8
A
299 304Right-handed alpha
Helix 18
AB9
A
339 347Right-handed alpha
Helix 19
AC1
A
357 361Right-handed alpha
Helix 20
AC2
A
390 394Right-handed 310
Helix 21
AC3
A
398 413Right-handed alpha
Helix 22
AC4
A
423 430Right-handed alpha
Helix 23
AC5
A
433 459Right-handed alpha
Helix 24
AC6
A
510 512Right-handed 310
Helix 25
AC7
A
513 522Right-handed alpha
Helix 26
AC8
B
23 27Right-handed 310
Helix 27
AC9
B
48 53Right-handed alpha
Helix 28
AD1
B
55 62Right-handed alpha
Helix 29
AD2
B
72 77Right-handed 310
Helix 30
AD3
B
85 96Right-handed alpha
Helix 31
AD4
B
101 112Right-handed alpha
Helix 32
AD5
B
118 131Right-handed alpha
Helix 33
AD6
B
149 164Right-handed alpha
Helix 34
AD7
B
183 198Right-handed alpha
Helix 35
AD8
B
210 214Right-handed alpha
Helix 36
AD9
B
219 233Right-handed alpha
Helix 37
AE1
B
242 253Right-handed alpha
Helix 38
AE2
B
256 260Right-handed 310
Helix 39
AE3
B
266 271Right-handed 310
Helix 40
AE4
B
285 287Right-handed 310
Helix 41
AE5
B
288 297Right-handed alpha
Helix 42
AE6
B
299 304Right-handed alpha
Helix 43
AE7
B
339 347Right-handed alpha
Helix 44
AE8
B
358 364Right-handed 310
Helix 45
AE9
B
390 394Right-handed 310
Helix 46
AF1
B
398 413Right-handed alpha
Helix 47
AF2
B
423 430Right-handed alpha
Helix 48
AF3
B
433 459Right-handed alpha
Helix 49
AF4
B
510 512Right-handed 310
Helix 50
AF5
B
513 523Right-handed alpha
Helix 51
AF6
C
6 10Right-handed 310
Helix 52
AF7
D
6 11Right-handed 310
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There are 8 sheets in PDB entry 7KNG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 383first strand
Strand 2
A
351 356parallel
Strand 3
A
417 422parallel
Strand 4
A
30 36parallel
Strand 5
A
460 466parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 69first strand
Strand 2
A
490 492anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 237first strand
Strand 2
A
263 264parallel
Strand 3
A
203 209anti-parallel
Strand 4
A
167 174parallel
Strand 5
A
134 140parallel
Strand 6
A
277 280parallel
Strand 7
A
314 317parallel
Strand 8
A
328 329parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
500 501first strand
Strand 2
A
536 537anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
378 383first strand
Strand 2
B
351 356parallel
Strand 3
B
417 422parallel
Strand 4
B
30 36parallel
Strand 5
B
460 466parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 69first strand
Strand 2
B
490 493anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
236 237first strand
Strand 2
B
263 264parallel
Strand 3
B
203 209anti-parallel
Strand 4
B
167 174parallel
Strand 5
B
134 140parallel
Strand 6
B
277 280parallel
Strand 7
B
314 317parallel
Strand 8
B
328 329parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
499 501first strand
Strand 2
B
536 538anti-parallel
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