Analysis of interatomic Contacts of Structural Units in PDB entry:
7KO9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KO9 entry

There is 1 chain in PDB entry 7KO9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2ASN 561
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 7KO9

There are 11 sheets in PDB entry 7KO9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 14 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
21 24parallel
Strand 3
A
49 52parallel
Strand 4
A
68 71parallel
Strand 5
A
87 90parallel
Strand 6
A
103 106parallel
Strand 7
A
122 125parallel
Strand 8
A
152 155parallel
Strand 9
A
169 172parallel
Strand 10
A
188 191parallel
Strand 11
A
204 207parallel
Strand 12
A
223 226parallel
Strand 13
A
242 245parallel
Strand 14
A
261 265parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 265first strand
Strand 2
A
296 299parallel
Strand 3
A
315 318parallel
Strand 4
A
334 338parallel
Strand 5
A
371 374parallel
Strand 6
A
390 393parallel
Strand 7
A
410 413parallel
Strand 8
A
428 431parallel
Strand 9
A
456 474parallel
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There are 14 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
27 29parallel
Strand 3
A
57 59parallel
Strand 4
A
76 83parallel
Strand 5
A
93 100parallel
Strand 6
A
111 118parallel
Strand 7
A
130 132parallel
Strand 8
A
158 160parallel
Strand 9
A
177 178parallel
Strand 10
A
194 196parallel
Strand 11
A
212 214parallel
Strand 12
A
231 233parallel
Strand 13
A
250 256parallel
Strand 14
A
236 237parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 118first strand
Strand 2
A
135 136parallel
Strand 3
A
162 164parallel
Strand 4
A
181 184parallel
Strand 5
A
198 201parallel
Strand 6
A
217 218parallel
Strand 7
A
236 237parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 16first strand
Strand 2
A
32 33parallel
Strand 3
A
62 63parallel
Strand 4
A
76 83parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 256first strand
Strand 2
A
269 274parallel
Strand 3
A
277 282anti-parallel
Strand 4
A
285 287anti-parallel
Strand 5
A
304 310parallel
Strand 6
A
290 291parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 310first strand
Strand 2
A
323 329parallel
Strand 3
A
342 347parallel
Strand 4
A
350 355anti-parallel
Strand 5
A
360 362anti-parallel
Strand 6
A
379 381parallel
Strand 7
A
398 400parallel
Strand 8
A
417 425parallel
Strand 9
A
456 474parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
456 474first strand
Strand 2
A
483 487parallel
Strand 3
A
516 522parallel
Strand 4
A
555 560anti-parallel
Strand 5
A
543 549anti-parallel
Strand 6
A
539 540anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
480 481first strand
Strand 2
A
456 474anti-parallel
Strand 3
A
490 501parallel
Strand 4
A
526 527parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
490 501first strand
Strand 2
A
532 534parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
384 385parallel
Strand 3
A
402 405parallel
Strand 4
A
417 425parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il