Analysis of interatomic Contacts of Structural Units in PDB entry:
7KOB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KOB entry

There is 1 chain in PDB entry 7KOB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0MET 364
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 7KOB

There are 5 sheets in PDB entry 7KOB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 18 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
21 24parallel
Strand 3
A
49 52parallel
Strand 4
A
68 71parallel
Strand 5
A
87 90parallel
Strand 6
A
103 106parallel
Strand 7
A
122 125parallel
Strand 8
A
152 155parallel
Strand 9
A
169 172parallel
Strand 10
A
188 191parallel
Strand 11
A
204 207parallel
Strand 12
A
223 226parallel
Strand 13
A
242 245parallel
Strand 14
A
261 265parallel
Strand 15
A
296 299parallel
Strand 16
A
315 318parallel
Strand 17
A
334 337parallel
Strand 18
A
362 363anti-parallel
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There are 20 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
27 29parallel
Strand 3
A
57 59parallel
Strand 4
A
76 78parallel
Strand 5
A
93 95parallel
Strand 6
A
111 113parallel
Strand 7
A
130 132parallel
Strand 8
A
158 164parallel
Strand 9
A
177 184parallel
Strand 10
A
194 201parallel
Strand 11
A
212 218parallel
Strand 12
A
231 233parallel
Strand 13
A
250 256parallel
Strand 14
A
269 274parallel
Strand 15
A
277 282anti-parallel
Strand 16
A
285 287anti-parallel
Strand 17
A
304 306parallel
Strand 18
A
323 329parallel
Strand 19
A
342 346parallel
Strand 20
A
352 355anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 16first strand
Strand 2
A
32 33parallel
Strand 3
A
62 63parallel
Strand 4
A
81 83parallel
Strand 5
A
98 100parallel
Strand 6
A
116 117parallel
Strand 7
A
135 136parallel
Strand 8
A
158 164parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 218first strand
Strand 2
A
236 237parallel
Strand 3
A
250 256parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 291first strand
Strand 2
A
309 310parallel
Strand 3
A
323 329parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il