Analysis of interatomic Contacts of Structural Units in PDB entry:
7KOH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7KOH entry

There are 3 chains in PDB entry 7KOH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 2	ASN 562
B	ALA 1	ASN 562
C	ALA 1	VAL 319

There is 1 helix in PDB entry 7KOH. Click on helix number for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	143	147	Right-handed 310

There are 30 sheets in PDB entry 7KOH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 24 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	5	first strand
Strand 2	A	21	24	parallel
Strand 3	A	49	52	parallel
Strand 4	A	68	71	parallel
Strand 5	A	87	90	parallel
Strand 6	A	104	107	parallel
Strand 7	A	123	126	parallel
Strand 8	A	153	156	parallel
Strand 9	A	170	173	parallel
Strand 10	A	189	192	parallel
Strand 11	A	205	208	parallel
Strand 12	A	224	227	parallel
Strand 13	A	243	246	parallel
Strand 14	A	262	266	parallel
Strand 15	A	297	300	parallel
Strand 16	A	316	319	parallel
Strand 17	A	335	339	parallel
Strand 18	A	372	375	parallel
Strand 19	A	391	394	parallel
Strand 20	A	411	414	parallel
Strand 21	A	429	432	parallel
Strand 22	A	462	474	parallel
Strand 23	A	491	502	parallel
Strand 24	A	527	528	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	366	367	first strand
Strand 2	A	385	386	parallel
Strand 3	A	403	406	parallel
Strand 4	A	423	426	parallel
Strand 5	A	462	474	parallel
Strand 6	A	491	502	parallel
Strand 7	A	533	535	parallel

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There are 18 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	11	first strand
Strand 2	A	27	29	parallel
Strand 3	A	57	59	parallel
Strand 4	A	76	78	parallel
Strand 5	A	93	95	parallel
Strand 6	A	112	114	parallel
Strand 7	A	131	133	parallel
Strand 8	A	159	165	parallel
Strand 9	A	178	185	parallel
Strand 10	A	195	202	parallel
Strand 11	A	213	219	parallel
Strand 12	A	232	238	parallel
Strand 13	A	251	257	parallel
Strand 14	A	270	275	parallel
Strand 15	A	278	283	anti-parallel
Strand 16	A	286	288	anti-parallel
Strand 17	A	305	311	parallel
Strand 18	A	291	292	parallel

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There are 30 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	16	first strand
Strand 2	A	31	33	parallel
Strand 3	A	62	63	parallel
Strand 4	A	81	82	parallel
Strand 5	A	98	100	parallel
Strand 6	A	117	120	parallel
Strand 7	A	136	137	parallel
Strand 8	A	159	165	parallel
Strand 9	A	178	185	parallel
Strand 10	A	195	202	parallel
Strand 11	A	213	219	parallel
Strand 12	A	232	238	parallel
Strand 13	A	251	257	parallel
Strand 14	A	270	275	parallel
Strand 15	A	278	283	anti-parallel
Strand 16	A	286	288	anti-parallel
Strand 17	A	305	311	parallel
Strand 18	A	324	330	parallel
Strand 19	A	343	348	parallel
Strand 20	A	351	356	anti-parallel
Strand 21	A	361	363	anti-parallel
Strand 22	A	380	382	parallel
Strand 23	A	399	401	parallel
Strand 24	A	418	420	parallel
Strand 25	A	457	460	parallel
Strand 26	A	484	488	parallel
Strand 27	A	517	523	parallel
Strand 28	A	556	560	anti-parallel
Strand 29	A	544	550	anti-parallel
Strand 30	A	539	541	anti-parallel

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There are 22 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	5	first strand
Strand 2	B	21	24	parallel
Strand 3	B	49	52	parallel
Strand 4	B	68	71	parallel
Strand 5	B	87	90	parallel
Strand 6	B	104	107	parallel
Strand 7	B	123	126	parallel
Strand 8	B	153	156	parallel
Strand 9	B	170	173	parallel
Strand 10	B	189	192	parallel
Strand 11	B	205	208	parallel
Strand 12	B	224	227	parallel
Strand 13	B	243	246	parallel
Strand 14	B	262	266	parallel
Strand 15	B	297	300	parallel
Strand 16	B	316	319	parallel
Strand 17	B	335	339	parallel
Strand 18	B	372	375	parallel
Strand 19	B	391	394	parallel
Strand 20	B	411	414	parallel
Strand 21	B	429	432	parallel
Strand 22	B	457	474	parallel

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There are 20 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	12	first strand
Strand 2	B	27	29	parallel
Strand 3	B	57	59	parallel
Strand 4	B	76	78	parallel
Strand 5	B	93	95	parallel
Strand 6	B	112	114	parallel
Strand 7	B	131	133	parallel
Strand 8	B	159	165	parallel
Strand 9	B	178	185	parallel
Strand 10	B	195	202	parallel
Strand 11	B	213	219	parallel
Strand 12	B	232	234	parallel
Strand 13	B	251	257	parallel
Strand 14	B	270	274	parallel
Strand 15	B	279	283	anti-parallel
Strand 16	B	286	288	anti-parallel
Strand 17	B	305	307	parallel
Strand 18	B	324	330	parallel
Strand 19	B	310	311	parallel
Strand 20	B	291	292	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	213	219	first strand
Strand 2	B	237	238	parallel
Strand 3	B	251	257	parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	16	first strand
Strand 2	B	32	33	parallel
Strand 3	B	62	63	parallel
Strand 4	B	81	83	parallel
Strand 5	B	98	100	parallel
Strand 6	B	117	118	parallel
Strand 7	B	136	137	parallel
Strand 8	B	159	165	parallel

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There are 10 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	324	330	first strand
Strand 2	B	343	348	parallel
Strand 3	B	351	356	anti-parallel
Strand 4	B	361	363	anti-parallel
Strand 5	B	380	382	parallel
Strand 6	B	399	401	parallel
Strand 7	B	418	426	parallel
Strand 8	B	403	406	parallel
Strand 9	B	385	386	parallel
Strand 10	B	366	367	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	491	502	first strand
Strand 2	B	533	535	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	418	426	first strand
Strand 2	B	457	474	parallel
Strand 3	B	484	488	parallel
Strand 4	B	517	523	parallel
Strand 5	B	556	561	anti-parallel
Strand 6	B	544	550	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	544	550	first strand
Strand 2	B	539	541	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	457	474	first strand
Strand 2	B	491	502	parallel
Strand 3	B	527	528	parallel

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There are 22 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	5	first strand
Strand 2	C	21	24	parallel
Strand 3	C	49	52	parallel
Strand 4	C	68	71	parallel
Strand 5	C	87	90	parallel
Strand 6	C	104	107	parallel
Strand 7	C	123	126	parallel
Strand 8	C	153	156	parallel
Strand 9	C	170	173	parallel
Strand 10	C	189	192	parallel
Strand 11	C	205	208	parallel
Strand 12	C	224	227	parallel
Strand 13	C	243	246	parallel
Strand 14	C	262	266	parallel
Strand 15	C	297	300	parallel
Strand 16	C	316	319	parallel
Strand 17	C	335	339	parallel
Strand 18	C	372	375	parallel
Strand 19	C	391	394	parallel
Strand 20	C	411	414	parallel
Strand 21	C	429	432	parallel
Strand 22	C	457	474	parallel

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There are 18 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	12	first strand
Strand 2	C	27	29	parallel
Strand 3	C	57	59	parallel
Strand 4	C	76	82	parallel
Strand 5	C	93	99	parallel
Strand 6	C	112	114	parallel
Strand 7	C	131	133	parallel
Strand 8	C	159	165	parallel
Strand 9	C	178	185	parallel
Strand 10	C	195	202	parallel
Strand 11	C	213	219	parallel
Strand 12	C	232	234	parallel
Strand 13	C	251	257	parallel
Strand 14	C	270	274	parallel
Strand 15	C	279	283	anti-parallel
Strand 16	C	286	288	anti-parallel
Strand 17	C	305	311	parallel
Strand 18	C	291	292	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	15	16	first strand
Strand 2	C	32	33	parallel
Strand 3	C	62	63	parallel
Strand 4	C	76	82	parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	93	99	first strand
Strand 2	C	117	118	parallel
Strand 3	C	136	137	parallel
Strand 4	C	159	165	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	213	219	first strand
Strand 2	C	237	238	parallel
Strand 3	C	251	257	parallel

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There are 11 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	305	311	first strand
Strand 2	C	324	330	parallel
Strand 3	C	343	348	parallel
Strand 4	C	351	355	anti-parallel
Strand 5	C	361	363	anti-parallel
Strand 6	C	380	382	parallel
Strand 7	C	399	401	parallel
Strand 8	C	418	426	parallel
Strand 9	C	403	406	parallel
Strand 10	C	385	386	parallel
Strand 11	C	366	367	parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	418	426	first strand
Strand 2	C	457	474	parallel
Strand 3	C	484	488	parallel
Strand 4	C	517	523	parallel
Strand 5	C	556	561	anti-parallel
Strand 6	C	544	550	anti-parallel
Strand 7	C	539	541	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	457	474	first strand
Strand 2	C	491	502	parallel
Strand 3	C	527	528	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	491	502	first strand
Strand 2	C	533	535	parallel

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There are 22 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	5	first strand
Strand 2	D	21	24	parallel
Strand 3	D	49	52	parallel
Strand 4	D	68	71	parallel
Strand 5	D	87	90	parallel
Strand 6	D	104	107	parallel
Strand 7	D	123	126	parallel
Strand 8	D	153	156	parallel
Strand 9	D	170	173	parallel
Strand 10	D	189	192	parallel
Strand 11	D	205	208	parallel
Strand 12	D	224	227	parallel
Strand 13	D	243	246	parallel
Strand 14	D	262	266	parallel
Strand 15	D	297	300	parallel
Strand 16	D	316	319	parallel
Strand 17	D	335	339	parallel
Strand 18	D	372	375	parallel
Strand 19	D	391	394	parallel
Strand 20	D	411	414	parallel
Strand 21	D	429	432	parallel
Strand 22	D	457	475	parallel

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There are 20 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	11	first strand
Strand 2	D	27	29	parallel
Strand 3	D	57	59	parallel
Strand 4	D	76	78	parallel
Strand 5	D	93	95	parallel
Strand 6	D	112	114	parallel
Strand 7	D	131	133	parallel
Strand 8	D	159	165	parallel
Strand 9	D	178	185	parallel
Strand 10	D	195	202	parallel
Strand 11	D	213	219	parallel
Strand 12	D	232	238	parallel
Strand 13	D	251	257	parallel
Strand 14	D	270	275	parallel
Strand 15	D	279	283	anti-parallel
Strand 16	D	286	288	anti-parallel
Strand 17	D	305	306	parallel
Strand 18	D	324	330	parallel
Strand 19	D	310	311	parallel
Strand 20	D	291	292	parallel

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There are 8 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	14	16	first strand
Strand 2	D	31	33	parallel
Strand 3	D	62	63	parallel
Strand 4	D	81	83	parallel
Strand 5	D	98	100	parallel
Strand 6	D	117	118	parallel
Strand 7	D	136	137	parallel
Strand 8	D	159	165	parallel

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There are 10 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	324	330	first strand
Strand 2	D	343	348	parallel
Strand 3	D	351	356	anti-parallel
Strand 4	D	361	363	anti-parallel
Strand 5	D	380	382	parallel
Strand 6	D	399	401	parallel
Strand 7	D	418	426	parallel
Strand 8	D	404	406	parallel
Strand 9	D	385	386	parallel
Strand 10	D	366	367	parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	457	475	first strand
Strand 2	D	492	503	parallel
Strand 3	D	533	535	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	418	426	first strand
Strand 2	D	457	475	parallel
Strand 3	D	481	482	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	457	475	first strand
Strand 2	D	484	488	parallel
Strand 3	D	517	523	parallel
Strand 4	D	556	560	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	539	541	first strand
Strand 2	D	544	550	anti-parallel
Strand 3	D	556	560	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7KOH

Analysis of interatomic Contacts of Structural Units in PDB entry:
7KOH