Analysis of interatomic Contacts of Structural Units in PDB entry:
7KP3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KP3 entry

There is 1 chain in PDB entry 7KP3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 209LEU 724
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 7KP3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
241 245Right-handed 310
Helix 2
AA2
A
258 262Right-handed 310
Helix 3
AA3
A
277 281Right-handed 310
Helix 4
AA4
A
283 293Right-handed alpha
Helix 5
AA5
A
387 391Right-handed 310
Helix 6
AA6
A
487 492Right-handed 310
Helix 7
AA7
A
522 526Right-handed 310
Helix 8
AA8
A
543 545Right-handed 310
Helix 9
AA9
A
552 556Right-handed 310
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There are 24 sheets in PDB entry 7KP3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 225first strand
Strand 2
A
228 239anti-parallel
Strand 3
A
661 677anti-parallel
Strand 4
A
294 315anti-parallel
Strand 5
A
322 325anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 225first strand
Strand 2
A
228 239anti-parallel
Strand 3
A
661 677anti-parallel
Strand 4
A
294 315anti-parallel
Strand 5
A
402 407anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 225first strand
Strand 2
A
228 239anti-parallel
Strand 3
A
661 677anti-parallel
Strand 4
A
294 315anti-parallel
Strand 5
A
414 415anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 325first strand
Strand 2
A
294 315anti-parallel
Strand 3
A
661 677anti-parallel
Strand 4
A
228 239anti-parallel
Strand 5
A
221 225anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 325first strand
Strand 2
A
294 315anti-parallel
Strand 3
A
661 677anti-parallel
Strand 4
A
228 239anti-parallel
Strand 5
A
361 362parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 362first strand
Strand 2
A
228 239parallel
Strand 3
A
661 677anti-parallel
Strand 4
A
294 315anti-parallel
Strand 5
A
322 325anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 362first strand
Strand 2
A
228 239parallel
Strand 3
A
661 677anti-parallel
Strand 4
A
294 315anti-parallel
Strand 5
A
402 407anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 362first strand
Strand 2
A
228 239parallel
Strand 3
A
661 677anti-parallel
Strand 4
A
294 315anti-parallel
Strand 5
A
414 415anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
402 407first strand
Strand 2
A
294 315anti-parallel
Strand 3
A
661 677anti-parallel
Strand 4
A
228 239anti-parallel
Strand 5
A
221 225anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
402 407first strand
Strand 2
A
294 315anti-parallel
Strand 3
A
661 677anti-parallel
Strand 4
A
228 239anti-parallel
Strand 5
A
361 362parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 415first strand
Strand 2
A
294 315anti-parallel
Strand 3
A
661 677anti-parallel
Strand 4
A
228 239anti-parallel
Strand 5
A
221 225anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 415first strand
Strand 2
A
294 315anti-parallel
Strand 3
A
661 677anti-parallel
Strand 4
A
228 239anti-parallel
Strand 5
A
361 362parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 252first strand
Strand 2
A
263 273anti-parallel
Strand 3
A
365 369anti-parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 252first strand
Strand 2
A
263 273anti-parallel
Strand 3
A
636 640anti-parallel
Strand 4
A
331 335anti-parallel
Strand 5
A
394 396anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 419first strand
Strand 2
A
721 722parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
436 441first strand
Strand 2
A
447 451anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
469 470first strand
Strand 2
A
587 588anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 476first strand
Strand 2
A
520 521anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
494 497first strand
Strand 2
A
500 503anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 512first strand
Strand 2
A
560 561parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
528 530first strand
Strand 2
A
547 549anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
567 570first strand
Strand 2
A
582 585anti-parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
608 610first strand
Strand 2
A
627 629parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
702 703first strand
Strand 2
A
709 710anti-parallel
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