Analysis of interatomic Contacts of Structural Units in PDB entry:
7KQ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KQ4 entry

There are 2 chains in PDB entry 7KQ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 6MET 830
B
 GLU 6MET 830
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 86 helices in PDB entry 7KQ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 21Right-handed alpha
Helix 2
AA2
A
26 29Right-handed 310
Helix 3
AA3
A
30 38Right-handed alpha
Helix 4
AA4
A
49 60Right-handed alpha
Helix 5
AA5
A
66 82Right-handed alpha
Helix 6
AA6
A
107 112Right-handed alpha
Helix 7
AA7
A
114 122Right-handed alpha
Helix 8
AA8
A
123 125Right-handed 310
Helix 9
AA9
A
133 144Right-handed alpha
Helix 10
AB1
A
144 149Right-handed alpha
Helix 11
AB2
A
152 161Right-handed alpha
Helix 12
AB3
A
162 170Right-handed alpha
Helix 13
AB4
A
197 220Right-handed alpha
Helix 14
AB5
A
224 230Right-handed alpha
Helix 15
AB6
A
230 263Right-handed alpha
Helix 16
AB7
A
265 282Right-handed alpha
Helix 17
AB8
A
289 308Right-handed alpha
Helix 18
AB9
A
318 323Right-handed alpha
Helix 19
AC1
A
323 333Right-handed alpha
Helix 20
AC2
A
337 355Right-handed alpha
Helix 21
AC3
A
361 367Right-handed alpha
Helix 22
AC4
A
391 404Right-handed alpha
Helix 23
AC5
A
420 432Right-handed alpha
Helix 24
AC6
A
443 453Right-handed alpha
Helix 25
AC7
A
456 462Right-handed alpha
Helix 26
AC8
A
488 497Right-handed alpha
Helix 27
AC9
A
501 505Right-handed 310
Helix 28
AD1
A
521 552Right-handed alpha
Helix 29
AD2
A
557 563Right-handed alpha
Helix 30
AD3
A
564 571Right-handed alpha
Helix 31
AD4
A
592 607Right-handed alpha
Helix 32
AD5
A
614 624Right-handed alpha
Helix 33
AD6
A
629 637Right-handed alpha
Helix 34
AD7
A
646 668Right-handed alpha
Helix 35
AD8
A
669 672Right-handed 310
Helix 36
AD9
A
684 691Right-handed alpha
Helix 37
AE1
A
720 730Right-handed alpha
Helix 38
AE2
A
749 752Right-handed 310
Helix 39
AE3
A
753 771Right-handed alpha
Helix 40
AE4
A
782 792Right-handed alpha
Helix 41
AE5
A
811 813Right-handed 310
Helix 42
AE6
A
814 824Right-handed alpha
Helix 43
AE7
B
9 20Right-handed alpha
Helix 44
AE8
B
27 29Right-handed 310
Helix 45
AE9
B
30 38Right-handed alpha
Helix 46
AF1
B
39 41Right-handed 310
Helix 47
AF2
B
49 60Right-handed alpha
Helix 48
AF3
B
66 82Right-handed alpha
Helix 49
AF4
B
107 112Right-handed alpha
Helix 50
AF5
B
114 122Right-handed alpha
Helix 51
AF6
B
123 125Right-handed 310
Helix 52
AF7
B
133 144Right-handed alpha
Helix 53
AF8
B
144 149Right-handed alpha
Helix 54
AF9
B
152 161Right-handed alpha
Helix 55
AG1
B
162 170Right-handed alpha
Helix 56
AG2
B
197 220Right-handed alpha
Helix 57
AG3
B
224 230Right-handed alpha
Helix 58
AG4
B
230 262Right-handed alpha
Helix 59
AG5
B
265 282Right-handed alpha
Helix 60
AG6
B
289 308Right-handed alpha
Helix 61
AG7
B
318 323Right-handed alpha
Helix 62
AG8
B
323 334Right-handed alpha
Helix 63
AG9
B
337 355Right-handed alpha
Helix 64
AH1
B
361 368Right-handed alpha
Helix 65
AH2
B
391 404Right-handed alpha
Helix 66
AH3
B
420 432Right-handed alpha
Helix 67
AH4
B
443 453Right-handed alpha
Helix 68
AH5
B
456 462Right-handed alpha
Helix 69
AH6
B
488 497Right-handed alpha
Helix 70
AH7
B
501 505Right-handed 310
Helix 71
AH8
B
515 519Right-handed 310
Helix 72
AH9
B
521 552Right-handed alpha
Helix 73
AI1
B
557 563Right-handed alpha
Helix 74
AI2
B
564 571Right-handed alpha
Helix 75
AI3
B
592 607Right-handed alpha
Helix 76
AI4
B
614 624Right-handed alpha
Helix 77
AI5
B
629 637Right-handed alpha
Helix 78
AI6
B
646 668Right-handed alpha
Helix 79
AI7
B
669 672Right-handed 310
Helix 80
AI8
B
684 691Right-handed alpha
Helix 81
AI9
B
720 730Right-handed alpha
Helix 82
AJ1
B
749 752Right-handed 310
Helix 83
AJ2
B
753 771Right-handed alpha
Helix 84
AJ3
B
782 792Right-handed alpha
Helix 85
AJ4
B
811 813Right-handed 310
Helix 86
AJ5
B
814 824Right-handed alpha
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There are 10 sheets in PDB entry 7KQ4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
103 104parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 184first strand
Strand 2
A
484 487anti-parallel
Strand 3
A
585 591parallel
Strand 4
A
674 679parallel
Strand 5
A
738 741parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
376 380first strand
Strand 2
A
410 415parallel
Strand 3
A
439 442parallel
Strand 4
A
775 780anti-parallel
Strand 5
A
744 747parallel
Strand 6
A
826 827parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 466first strand
Strand 2
A
470 472anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
800 802first strand
Strand 2
A
807 809anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 47first strand
Strand 2
B
103 104parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
182 184first strand
Strand 2
B
484 487anti-parallel
Strand 3
B
585 591parallel
Strand 4
B
674 679parallel
Strand 5
B
738 741parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
376 380first strand
Strand 2
B
410 415parallel
Strand 3
B
439 442parallel
Strand 4
B
775 780anti-parallel
Strand 5
B
744 747parallel
Strand 6
B
826 827parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
464 466first strand
Strand 2
B
470 472anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
800 802first strand
Strand 2
B
807 809anti-parallel
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