Analysis of interatomic Contacts of Structural Units in PDB entry:
7KQU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KQU entry

There are 2 chains in PDB entry 7KQU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 6SER 307
B
 GLY 6GLY 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 7KQU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 63Right-handed alpha
Helix 2
AA2
A
75 105Right-handed alpha
Helix 3
AA3
A
108 134Right-handed alpha
Helix 4
AA4
A
137 144Right-handed alpha
Helix 5
AA5
A
144 153Right-handed alpha
Helix 6
AA6
A
157 166Right-handed 310
Helix 7
AA7
A
167 172Right-handed alpha
Helix 8
AA8
A
176 182Right-handed alpha
Helix 9
AA9
A
182 204Right-handed alpha
Helix 10
AB1
A
209 214Right-handed alpha
Helix 11
AB2
A
224 234Right-handed alpha
Helix 12
AB3
A
242 265Right-handed alpha
Helix 13
AB4
A
273 277Right-handed 310
Helix 14
AB5
A
278 282Right-handed 310
Helix 15
AB6
A
283 292Right-handed alpha
Helix 16
AB7
A
292 306Right-handed alpha
Helix 17
AB8
B
47 62Right-handed alpha
Helix 18
AB9
B
75 105Right-handed alpha
Helix 19
AC1
B
108 134Right-handed alpha
Helix 20
AC2
B
137 144Right-handed alpha
Helix 21
AC3
B
144 153Right-handed alpha
Helix 22
AC4
B
157 166Right-handed 310
Helix 23
AC5
B
167 172Right-handed alpha
Helix 24
AC6
B
176 182Right-handed alpha
Helix 25
AC7
B
182 204Right-handed alpha
Helix 26
AC8
B
209 214Right-handed alpha
Helix 27
AC9
B
224 234Right-handed alpha
Helix 28
AD1
B
242 265Right-handed alpha
Helix 29
AD2
B
273 277Right-handed 310
Helix 30
AD3
B
278 282Right-handed 310
Helix 31
AD4
B
283 292Right-handed alpha
Helix 32
AD5
B
292 306Right-handed alpha
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There are 2 sheets in PDB entry 7KQU. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 32first strand
Strand 2
A
236 238parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 32first strand
Strand 2
B
236 238parallel
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