Analysis of interatomic Contacts of Structural Units in PDB entry:
7KRO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7KRO entry

There are 8 chains in PDB entry 7KRO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 3	THR 929
B	PHE 6	ALA 191
C	SER 1	MET 75
D	SER 7	ALA 191
E	ALA 1	LEU 590
F	ALA 1	LEU 590
P	C 3	C 39
T	C 6	G 53

There are 99 helices in PDB entry 7KRO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	13	Right-handed alpha
Helix 2	AA2	A	61	63	Right-handed 310
Helix 3	AA3	A	76	90	Right-handed alpha
Helix 4	AA4	A	123	133	Right-handed alpha
Helix 5	AA5	A	142	149	Right-handed alpha
Helix 6	AA6	A	155	159	Right-handed 310
Helix 7	AA7	A	170	177	Right-handed alpha
Helix 8	AA8	A	178	198	Right-handed alpha
Helix 9	AA9	A	206	210	Right-handed 310
Helix 10	AB1	A	243	248	Right-handed alpha
Helix 11	AB2	A	251	255	Right-handed 310
Helix 12	AB3	A	256	260	Right-handed 310
Helix 13	AB4	A	275	286	Right-handed alpha
Helix 14	AB5	A	297	301	Right-handed 310
Helix 15	AB6	A	306	318	Right-handed alpha
Helix 16	AB7	A	367	377	Right-handed alpha
Helix 17	AB8	A	377	384	Right-handed alpha
Helix 18	AB9	A	416	426	Right-handed alpha
Helix 19	AC1	A	447	454	Right-handed alpha
Helix 20	AC2	A	455	459	Right-handed 310
Helix 21	AC3	A	468	480	Right-handed alpha
Helix 22	AC4	A	489	493	Right-handed 310
Helix 23	AC5	A	503	508	Right-handed alpha
Helix 24	AC6	A	511	519	Right-handed alpha
Helix 25	AC7	A	521	531	Right-handed alpha
Helix 26	AC8	A	561	580	Right-handed alpha
Helix 27	AC9	A	596	606	Right-handed alpha
Helix 28	AD1	A	627	638	Right-handed alpha
Helix 29	AD2	A	647	662	Right-handed alpha
Helix 30	AD3	A	687	709	Right-handed alpha
Helix 31	AD4	A	717	733	Right-handed alpha
Helix 32	AD5	A	738	753	Right-handed alpha
Helix 33	AD6	A	768	774	Right-handed alpha
Helix 34	AD7	A	778	790	Right-handed alpha
Helix 35	AD8	A	795	799	Right-handed 310
Helix 36	AD9	A	835	842	Right-handed alpha
Helix 37	AE1	A	846	852	Right-handed 310
Helix 38	AE2	A	858	867	Right-handed alpha
Helix 39	AE3	A	868	872	Right-handed 310
Helix 40	AE4	A	874	902	Right-handed alpha
Helix 41	AE5	A	917	924	Right-handed alpha
Helix 42	AE6	B	9	29	Right-handed alpha
Helix 43	AE7	B	31	98	Right-handed alpha
Helix 44	AE8	B	101	109	Right-handed alpha
Helix 45	AE9	B	119	125	Right-handed alpha
Helix 46	AF1	B	134	142	Right-handed alpha
Helix 47	AF2	B	168	172	Right-handed 310
Helix 48	AF3	C	2	20	Right-handed alpha
Helix 49	AF4	C	25	41	Right-handed alpha
Helix 50	AF5	C	44	61	Right-handed alpha
Helix 51	AF6	C	67	72	Right-handed alpha
Helix 52	AF7	C	73	75	Right-handed 310
Helix 53	AF8	D	9	29	Right-handed alpha
Helix 54	AF9	D	31	82	Right-handed alpha
Helix 55	AG1	D	82	99	Right-handed alpha
Helix 56	AG2	D	101	112	Right-handed alpha
Helix 57	AG3	D	134	140	Right-handed alpha
Helix 58	AG4	D	168	172	Right-handed 310
Helix 59	AG5	D	176	180	Right-handed 310
Helix 60	AG6	E	26	35	Right-handed alpha
Helix 61	AG7	E	59	62	Right-handed 310
Helix 62	AG8	E	93	97	Right-handed 310
Helix 63	AG9	E	102	112	Right-handed alpha
Helix 64	AH1	E	116	123	Right-handed alpha
Helix 65	AH2	E	127	148	Right-handed alpha
Helix 66	AH3	E	262	264	Right-handed 310
Helix 67	AH4	E	265	275	Right-handed alpha
Helix 68	AH5	E	287	299	Right-handed alpha
Helix 69	AH6	E	311	325	Right-handed alpha
Helix 70	AH7	E	376	379	Right-handed 310
Helix 71	AH8	E	380	390	Right-handed alpha
Helix 72	AH9	E	418	422	Right-handed 310
Helix 73	AI1	E	423	433	Right-handed alpha
Helix 74	AI2	E	445	455	Right-handed alpha
Helix 75	AI3	E	489	500	Right-handed alpha
Helix 76	AI4	E	503	509	Right-handed 310
Helix 77	AI5	E	515	526	Right-handed alpha
Helix 78	AI6	E	557	566	Right-handed alpha
Helix 79	AI7	E	578	584	Right-handed alpha
Helix 80	AI8	F	26	35	Right-handed alpha
Helix 81	AI9	F	59	62	Right-handed 310
Helix 82	AJ1	F	93	97	Right-handed 310
Helix 83	AJ2	F	102	112	Right-handed alpha
Helix 84	AJ3	F	116	123	Right-handed alpha
Helix 85	AJ4	F	127	148	Right-handed alpha
Helix 86	AJ5	F	262	264	Right-handed 310
Helix 87	AJ6	F	265	275	Right-handed alpha
Helix 88	AJ7	F	287	299	Right-handed alpha
Helix 89	AJ8	F	311	325	Right-handed alpha
Helix 90	AJ9	F	376	379	Right-handed 310
Helix 91	AK1	F	380	390	Right-handed alpha
Helix 92	AK2	F	418	422	Right-handed 310
Helix 93	AK3	F	423	433	Right-handed alpha
Helix 94	AK4	F	445	455	Right-handed alpha
Helix 95	AK5	F	489	500	Right-handed alpha
Helix 96	AK6	F	503	509	Right-handed 310
Helix 97	AK7	F	515	526	Right-handed alpha
Helix 98	AK8	F	557	566	Right-handed alpha
Helix 99	AK9	F	578	584	Right-handed alpha

There are 28 sheets in PDB entry 7KRO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	18	21	first strand
Strand 2	A	55	59	anti-parallel
Strand 3	A	65	71	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	32	first strand
Strand 2	A	49	50	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	38	first strand
Strand 2	A	43	45	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	99	105	first strand
Strand 2	A	110	116	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	224	first strand
Strand 2	A	201	204	anti-parallel
Strand 3	A	231	233	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	352	355	first strand
Strand 2	A	338	348	anti-parallel
Strand 3	A	327	335	anti-parallel
Strand 4	B	115	116	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	387	390	first strand
Strand 2	B	127	132	parallel
Strand 3	B	184	190	anti-parallel
Strand 4	B	152	160	anti-parallel
Strand 5	B	146	149	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	397	399	first strand
Strand 2	A	673	675	anti-parallel
Strand 3	A	666	668	anti-parallel
Strand 4	A	539	544	parallel
Strand 5	A	556	560	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	414	415	first strand
Strand 2	A	843	844	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	755	758	first strand
Strand 2	A	761	767	anti-parallel
Strand 3	A	612	615	anti-parallel
Strand 4	A	801	802	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	815	822	first strand
Strand 2	A	825	832	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	127	132	first strand
Strand 2	D	184	190	anti-parallel
Strand 3	D	152	160	anti-parallel
Strand 4	D	146	149	anti-parallel
Strand 5	D	142	143	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	4	first strand
Strand 2	E	11	12	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	24	25	first strand
Strand 2	E	14	16	anti-parallel
Strand 3	E	42	43	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	69	71	first strand
Strand 2	E	64	66	anti-parallel
Strand 3	E	81	82	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	84	85	first strand
Strand 2	E	88	89	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	152	157	first strand
Strand 2	E	162	167	anti-parallel
Strand 3	E	209	213	anti-parallel
Strand 4	E	194	202	anti-parallel
Strand 5	E	181	185	anti-parallel
Strand 6	E	224	227	anti-parallel
Strand 7	E	152	157	anti-parallel

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There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	347	348	first strand
Strand 2	E	330	332	parallel
Strand 3	E	355	359	parallel
Strand 4	E	305	308	parallel
Strand 5	E	371	374	parallel
Strand 6	E	396	399	parallel
Strand 7	E	277	281	parallel
Strand 8	E	436	437	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	366	367	first strand
Strand 2	E	391	392	parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	471	474	first strand
Strand 2	E	568	575	parallel
Strand 3	E	541	547	parallel
Strand 4	E	510	512	parallel
Strand 5	E	530	531	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	4	first strand
Strand 2	F	11	12	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	24	25	first strand
Strand 2	F	14	16	anti-parallel
Strand 3	F	42	43	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	69	71	first strand
Strand 2	F	64	66	anti-parallel
Strand 3	F	81	82	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	84	85	first strand
Strand 2	F	88	89	anti-parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	152	157	first strand
Strand 2	F	162	167	anti-parallel
Strand 3	F	209	213	anti-parallel
Strand 4	F	194	202	anti-parallel
Strand 5	F	181	185	anti-parallel
Strand 6	F	224	227	anti-parallel
Strand 7	F	152	157	anti-parallel

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There are 8 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	347	348	first strand
Strand 2	F	330	332	parallel
Strand 3	F	355	359	parallel
Strand 4	F	305	308	parallel
Strand 5	F	371	374	parallel
Strand 6	F	396	399	parallel
Strand 7	F	277	281	parallel
Strand 8	F	436	437	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	366	367	first strand
Strand 2	F	391	392	parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	471	474	first strand
Strand 2	F	568	575	parallel
Strand 3	F	541	547	parallel
Strand 4	F	510	512	parallel
Strand 5	F	530	531	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7KRO

Analysis of interatomic Contacts of Structural Units in PDB entry:
7KRO