Analysis of interatomic Contacts of Structural Units in PDB entry:
7KRZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7KRZ entry

There are 7 chains in PDB entry 7KRZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 417	PHE 947
B	ALA 416	PHE 947
C	ASP 415	PHE 947
D	ASP 415	PHE 947
E	PHE 421	PHE 947
F	LYS 420	PHE 947
G	UNK 1	UNK 12

There are125 helices in PDB entry 7KRZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	417	425	Right-handed alpha
Helix 2	AA2	A	431	446	Right-handed alpha
Helix 3	AA3	A	452	468	Right-handed alpha
Helix 4	AA4	A	479	491	Right-handed alpha
Helix 5	AA5	A	494	511	Right-handed alpha
Helix 6	AA6	A	531	540	Right-handed alpha
Helix 7	AA7	A	554	558	Right-handed 310
Helix 8	AA8	A	571	581	Right-handed alpha
Helix 9	AA9	A	602	611	Right-handed alpha
Helix 10	AB1	A	641	645	Right-handed 310
Helix 11	AB2	A	646	651	Right-handed alpha
Helix 12	AB3	A	662	673	Right-handed alpha
Helix 13	AB4	A	673	683	Right-handed alpha
Helix 14	AB5	A	692	703	Right-handed alpha
Helix 15	AB6	A	709	729	Right-handed alpha
Helix 16	AB7	A	742	747	Right-handed alpha
Helix 17	AB8	A	807	829	Right-handed alpha
Helix 18	AB9	A	856	870	Right-handed alpha
Helix 19	AC1	A	894	905	Right-handed alpha
Helix 20	AC2	A	916	922	Right-handed alpha
Helix 21	AC3	A	938	947	Right-handed alpha
Helix 22	AC4	B	417	421	Right-handed alpha
Helix 23	AC5	B	423	427	Right-handed 310
Helix 24	AC6	B	431	446	Right-handed alpha
Helix 25	AC7	B	452	468	Right-handed alpha
Helix 26	AC8	B	479	489	Right-handed alpha
Helix 27	AC9	B	494	511	Right-handed alpha
Helix 28	AD1	B	531	540	Right-handed alpha
Helix 29	AD2	B	555	560	Right-handed alpha
Helix 30	AD3	B	570	581	Right-handed alpha
Helix 31	AD4	B	591	595	Right-handed 310
Helix 32	AD5	B	602	605	Right-handed 310
Helix 33	AD6	B	606	611	Right-handed alpha
Helix 34	AD7	B	614	618	Right-handed 310
Helix 35	AD8	B	646	653	Right-handed alpha
Helix 36	AD9	B	662	683	Right-handed alpha
Helix 37	AE1	B	692	703	Right-handed alpha
Helix 38	AE2	B	709	729	Right-handed alpha
Helix 39	AE3	B	742	747	Right-handed alpha
Helix 40	AE4	B	807	829	Right-handed alpha
Helix 41	AE5	B	856	869	Right-handed alpha
Helix 42	AE6	B	894	905	Right-handed alpha
Helix 43	AE7	B	916	922	Right-handed alpha
Helix 44	AE8	B	938	947	Right-handed alpha
Helix 45	AE9	C	416	427	Right-handed alpha
Helix 46	AF1	C	431	446	Right-handed alpha
Helix 47	AF2	C	452	466	Right-handed alpha
Helix 48	AF3	C	479	489	Right-handed alpha
Helix 49	AF4	C	494	511	Right-handed alpha
Helix 50	AF5	C	530	540	Right-handed alpha
Helix 51	AF6	C	555	560	Right-handed alpha
Helix 52	AF7	C	571	581	Right-handed alpha
Helix 53	AF8	C	592	595	Right-handed 310
Helix 54	AF9	C	602	611	Right-handed alpha
Helix 55	AG1	C	614	618	Right-handed 310
Helix 56	AG2	C	646	651	Right-handed alpha
Helix 57	AG3	C	662	683	Right-handed alpha
Helix 58	AG4	C	692	703	Right-handed alpha
Helix 59	AG5	C	709	729	Right-handed alpha
Helix 60	AG6	C	742	747	Right-handed alpha
Helix 61	AG7	C	807	829	Right-handed alpha
Helix 62	AG8	C	856	870	Right-handed alpha
Helix 63	AG9	C	894	905	Right-handed alpha
Helix 64	AH1	C	916	922	Right-handed alpha
Helix 65	AH2	C	938	947	Right-handed alpha
Helix 66	AH3	D	416	425	Right-handed alpha
Helix 67	AH4	D	431	446	Right-handed alpha
Helix 68	AH5	D	452	467	Right-handed alpha
Helix 69	AH6	D	479	489	Right-handed alpha
Helix 70	AH7	D	494	512	Right-handed alpha
Helix 71	AH8	D	528	541	Right-handed alpha
Helix 72	AH9	D	555	560	Right-handed alpha
Helix 73	AI1	D	570	581	Right-handed alpha
Helix 74	AI2	D	606	611	Right-handed alpha
Helix 75	AI3	D	612	617	Right-handed alpha
Helix 76	AI4	D	646	653	Right-handed alpha
Helix 77	AI5	D	662	673	Right-handed alpha
Helix 78	AI6	D	673	683	Right-handed alpha
Helix 79	AI7	D	692	703	Right-handed alpha
Helix 80	AI8	D	710	729	Right-handed alpha
Helix 81	AI9	D	742	747	Right-handed alpha
Helix 82	AJ1	D	807	829	Right-handed alpha
Helix 83	AJ2	D	856	870	Right-handed alpha
Helix 84	AJ3	D	894	905	Right-handed alpha
Helix 85	AJ4	D	916	922	Right-handed alpha
Helix 86	AJ5	D	938	947	Right-handed alpha
Helix 87	AJ6	E	421	426	Right-handed 310
Helix 88	AJ7	E	431	448	Right-handed alpha
Helix 89	AJ8	E	452	468	Right-handed alpha
Helix 90	AJ9	E	479	491	Right-handed alpha
Helix 91	AK1	E	494	512	Right-handed alpha
Helix 92	AK2	E	530	540	Right-handed alpha
Helix 93	AK3	E	555	560	Right-handed alpha
Helix 94	AK4	E	573	581	Right-handed alpha
Helix 95	AK5	E	603	611	Right-handed alpha
Helix 96	AK6	E	648	652	Right-handed 310
Helix 97	AK7	E	662	683	Right-handed alpha
Helix 98	AK8	E	692	702	Right-handed alpha
Helix 99	AK9	E	709	729	Right-handed alpha
Helix 100	AL1	E	742	747	Right-handed alpha
Helix 101	AL2	E	807	829	Right-handed alpha
Helix 102	AL3	E	856	870	Right-handed alpha
Helix 103	AL4	E	894	905	Right-handed alpha
Helix 104	AL5	E	916	921	Right-handed alpha
Helix 105	AL6	E	938	947	Right-handed alpha
Helix 106	AL7	F	422	426	Right-handed 310
Helix 107	AL8	F	431	448	Right-handed alpha
Helix 108	AL9	F	454	466	Right-handed alpha
Helix 109	AM1	F	479	490	Right-handed alpha
Helix 110	AM2	F	494	512	Right-handed alpha
Helix 111	AM3	F	530	540	Right-handed alpha
Helix 112	AM4	F	571	581	Right-handed alpha
Helix 113	AM5	F	591	595	Right-handed 310
Helix 114	AM6	F	603	611	Right-handed alpha
Helix 115	AM7	F	646	652	Right-handed alpha
Helix 116	AM8	F	662	673	Right-handed alpha
Helix 117	AM9	F	673	683	Right-handed alpha
Helix 118	AN1	F	692	703	Right-handed alpha
Helix 119	AN2	F	709	729	Right-handed alpha
Helix 120	AN3	F	742	747	Right-handed alpha
Helix 121	AN4	F	807	829	Right-handed alpha
Helix 122	AN5	F	856	869	Right-handed alpha
Helix 123	AN6	F	894	905	Right-handed alpha
Helix 124	AN7	F	916	922	Right-handed alpha
Helix 125	AN8	F	938	947	Right-handed alpha

There are 30 sheets in PDB entry 7KRZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	544	548	first strand
Strand 2	A	586	590	parallel
Strand 3	A	634	639	parallel
Strand 4	A	518	522	parallel
Strand 5	A	654	657	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	619	620	first strand
Strand 2	A	627	628	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	689	690	first strand
Strand 2	A	735	736	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	765	769	first strand
Strand 2	A	776	784	anti-parallel
Strand 3	A	839	843	anti-parallel
Strand 4	A	799	803	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	877	879	first strand
Strand 2	A	909	913	parallel
Strand 3	A	932	936	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	882	883	first strand
Strand 2	A	889	890	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	543	548	first strand
Strand 2	B	585	590	parallel
Strand 3	B	634	639	parallel
Strand 4	B	518	522	parallel
Strand 5	B	654	657	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	619	620	first strand
Strand 2	B	627	628	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	689	691	first strand
Strand 2	B	735	737	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	799	803	first strand
Strand 2	B	839	843	parallel
Strand 3	B	779	784	anti-parallel
Strand 4	B	765	767	anti-parallel
Strand 5	B	878	879	parallel
Strand 6	B	910	913	parallel
Strand 7	B	933	936	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	769	770	first strand
Strand 2	B	775	776	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	882	883	first strand
Strand 2	B	889	890	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	544	548	first strand
Strand 2	C	586	590	parallel
Strand 3	C	634	639	parallel
Strand 4	C	518	522	parallel
Strand 5	C	654	657	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	619	620	first strand
Strand 2	C	627	628	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	689	690	first strand
Strand 2	C	735	736	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	799	803	first strand
Strand 2	C	839	843	parallel
Strand 3	C	775	784	anti-parallel
Strand 4	C	765	770	anti-parallel
Strand 5	C	877	879	parallel
Strand 6	C	909	913	parallel
Strand 7	C	932	936	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	882	883	first strand
Strand 2	C	889	890	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	544	548	first strand
Strand 2	D	586	590	parallel
Strand 3	D	634	639	parallel
Strand 4	D	518	522	parallel
Strand 5	D	654	657	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	689	691	first strand
Strand 2	D	735	737	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	765	771	first strand
Strand 2	D	774	784	anti-parallel
Strand 3	D	839	843	anti-parallel
Strand 4	D	799	803	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	878	879	first strand
Strand 2	D	909	913	parallel
Strand 3	D	932	936	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	882	883	first strand
Strand 2	D	889	890	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	545	548	first strand
Strand 2	E	587	590	parallel
Strand 3	E	635	639	parallel
Strand 4	E	518	522	parallel
Strand 5	E	654	657	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	689	691	first strand
Strand 2	E	735	737	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	799	803	first strand
Strand 2	E	839	843	parallel
Strand 3	E	775	784	anti-parallel
Strand 4	E	765	770	anti-parallel
Strand 5	E	877	879	parallel
Strand 6	E	909	913	parallel
Strand 7	E	932	936	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	882	883	first strand
Strand 2	E	889	890	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	544	548	first strand
Strand 2	F	586	590	parallel
Strand 3	F	634	639	parallel
Strand 4	F	518	522	parallel
Strand 5	F	653	657	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	689	690	first strand
Strand 2	F	735	736	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	799	803	first strand
Strand 2	F	839	843	parallel
Strand 3	F	775	784	anti-parallel
Strand 4	F	765	770	anti-parallel
Strand 5	F	877	879	parallel
Strand 6	F	909	913	parallel
Strand 7	F	932	936	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	882	883	first strand
Strand 2	F	889	890	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7KRZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7KRZ