Analysis of interatomic Contacts of Structural Units in PDB entry:
7KUH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KUH entry

There is 1 chain in PDB entry 7KUH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 MET 1ALA 283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 7KUH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
X
6 10Right-handed 310
Helix 2
AA2
X
11 18Right-handed alpha
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There are 4 sheets in PDB entry 7KUH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
26 32first strand
Strand 2
X
38 48anti-parallel
Strand 3
X
54 57anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
26 32first strand
Strand 2
X
38 48anti-parallel
Strand 3
X
60 63anti-parallel
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There are 16 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
70 73first strand
Strand 2
X
83 88anti-parallel
Strand 3
X
95 102anti-parallel
Strand 4
X
111 120anti-parallel
Strand 5
X
123 132anti-parallel
Strand 6
X
135 144anti-parallel
Strand 7
X
149 158anti-parallel
Strand 8
X
163 174anti-parallel
Strand 9
X
178 185anti-parallel
Strand 10
X
189 190anti-parallel
Strand 11
X
202 211anti-parallel
Strand 12
X
217 225anti-parallel
Strand 13
X
232 238anti-parallel
Strand 14
X
242 252anti-parallel
Strand 15
X
255 264anti-parallel
Strand 16
X
275 281anti-parallel
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There are 16 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
70 73first strand
Strand 2
X
83 88anti-parallel
Strand 3
X
95 102anti-parallel
Strand 4
X
111 120anti-parallel
Strand 5
X
123 132anti-parallel
Strand 6
X
135 144anti-parallel
Strand 7
X
149 158anti-parallel
Strand 8
X
163 174anti-parallel
Strand 9
X
178 185anti-parallel
Strand 10
X
193 197anti-parallel
Strand 11
X
202 211anti-parallel
Strand 12
X
217 225anti-parallel
Strand 13
X
232 238anti-parallel
Strand 14
X
242 252anti-parallel
Strand 15
X
255 264anti-parallel
Strand 16
X
275 281anti-parallel
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