Analysis of interatomic Contacts of Structural Units in PDB entry:
7KW2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KW2 entry

There are 2 chains in PDB entry 7KW2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2481VAL 2999
B
 VAL 2481ALA 3000
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 7KW2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2481 2497Right-handed alpha
Helix 2
AA2
A
2513 2529Right-handed alpha
Helix 3
AA3
A
2533 2540Right-handed alpha
Helix 4
AA4
A
2542 2552Right-handed alpha
Helix 5
AA5
A
2572 2586Right-handed alpha
Helix 6
AA6
A
2604 2619Right-handed alpha
Helix 7
AA7
A
2620 2622Right-handed 310
Helix 8
AA8
A
2655 2666Right-handed alpha
Helix 9
AA9
A
2698 2700Right-handed 310
Helix 10
AB1
A
2701 2703Right-handed 310
Helix 11
AB2
A
2704 2721Right-handed alpha
Helix 12
AB3
A
2733 2746Right-handed alpha
Helix 13
AB4
A
2753 2766Right-handed alpha
Helix 14
AB5
A
2797 2812Right-handed alpha
Helix 15
AB6
A
2814 2830Right-handed alpha
Helix 16
AB7
A
2872 2889Right-handed alpha
Helix 17
AB8
A
2894 2903Right-handed alpha
Helix 18
AB9
A
2929 2933Right-handed 310
Helix 19
AC1
A
2973 2994Right-handed alpha
Helix 20
AC2
B
2482 2497Right-handed alpha
Helix 21
AC3
B
2513 2529Right-handed alpha
Helix 22
AC4
B
2533 2540Right-handed alpha
Helix 23
AC5
B
2542 2550Right-handed alpha
Helix 24
AC6
B
2572 2586Right-handed alpha
Helix 25
AC7
B
2604 2619Right-handed alpha
Helix 26
AC8
B
2620 2622Right-handed 310
Helix 27
AC9
B
2639 2643Right-handed 310
Helix 28
AD1
B
2655 2666Right-handed alpha
Helix 29
AD2
B
2698 2700Right-handed 310
Helix 30
AD3
B
2701 2703Right-handed 310
Helix 31
AD4
B
2704 2720Right-handed alpha
Helix 32
AD5
B
2733 2746Right-handed alpha
Helix 33
AD6
B
2753 2766Right-handed alpha
Helix 34
AD7
B
2797 2812Right-handed alpha
Helix 35
AD8
B
2814 2830Right-handed alpha
Helix 36
AD9
B
2872 2889Right-handed alpha
Helix 37
AE1
B
2894 2903Right-handed alpha
Helix 38
AE2
B
2929 2933Right-handed 310
Helix 39
AE3
B
2973 2994Right-handed alpha
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There are 8 sheets in PDB entry 7KW2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2646 2651first strand
Strand 2
A
2676 2682parallel
Strand 3
A
2689 2696anti-parallel
Strand 4
A
2592 2599anti-parallel
Strand 5
A
2935 2938anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2624 2628first strand
Strand 2
A
2633 2637anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2789 2795first strand
Strand 2
A
2961 2968anti-parallel
Strand 3
A
2949 2955anti-parallel
Strand 4
A
2916 2922parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2835 2843first strand
Strand 2
A
2858 2866anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2646 2652first strand
Strand 2
B
2676 2683parallel
Strand 3
B
2689 2696anti-parallel
Strand 4
B
2592 2599anti-parallel
Strand 5
B
2935 2938anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2624 2627first strand
Strand 2
B
2634 2637anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2789 2795first strand
Strand 2
B
2961 2968anti-parallel
Strand 3
B
2949 2955anti-parallel
Strand 4
B
2916 2922parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2835 2843first strand
Strand 2
B
2858 2866anti-parallel
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