Analysis of interatomic Contacts of Structural Units in PDB entry:
7KW7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7KW7 entry

There are 6 chains in PDB entry 7KW7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 16	ASP 699
B	GLU 16	ASP 732
C	ALA 4	ASP 641
D	ALA 4	GLY 382
E	ASP 217	ARG 543
F	SER 519	LYS 777

There are128 helices in PDB entry 7KW7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	23	36	Right-handed alpha
Helix 2	AA2	A	42	63	Right-handed alpha
Helix 3	AA3	A	64	65	Right-handed 310
Helix 4	AA4	A	66	71	Right-handed 310
Helix 5	AA5	A	84	86	Right-handed 310
Helix 6	AA6	A	99	105	Right-handed alpha
Helix 7	AA7	A	106	109	Right-handed 310
Helix 8	AA8	A	110	124	Right-handed alpha
Helix 9	AA9	A	127	135	Right-handed 310
Helix 10	AB1	A	136	143	Right-handed 310
Helix 11	AB2	A	192	198	Right-handed 310
Helix 12	AB3	A	199	211	Right-handed alpha
Helix 13	AB4	A	295	299	Right-handed 310
Helix 14	AB5	A	305	318	Right-handed alpha
Helix 15	AB6	A	349	353	Right-handed 310
Helix 16	AB7	A	356	359	Right-handed 310
Helix 17	AB8	A	379	383	Right-handed 310
Helix 18	AB9	A	399	405	Right-handed alpha
Helix 19	AC1	A	406	429	Right-handed alpha
Helix 20	AC2	A	430	452	Right-handed alpha
Helix 21	AC3	A	455	461	Right-handed alpha
Helix 22	AC4	A	477	482	Right-handed alpha
Helix 23	AC5	A	498	504	Right-handed alpha
Helix 24	AC6	A	505	507	Right-handed 310
Helix 25	AC7	A	508	514	Right-handed alpha
Helix 26	AC8	A	525	533	Right-handed alpha
Helix 27	AC9	A	554	568	Right-handed alpha
Helix 28	AD1	A	568	579	Right-handed alpha
Helix 29	AD2	A	607	618	Right-handed alpha
Helix 30	AD3	A	622	630	Right-handed alpha
Helix 31	AD4	A	640	653	Right-handed alpha
Helix 32	AD5	A	656	674	Right-handed alpha
Helix 33	AD6	A	680	696	Right-handed alpha
Helix 34	AD7	B	23	35	Right-handed alpha
Helix 35	AD8	B	42	66	Right-handed alpha
Helix 36	AD9	B	67	71	Right-handed 310
Helix 37	AE1	B	99	105	Right-handed alpha
Helix 38	AE2	B	106	109	Right-handed 310
Helix 39	AE3	B	110	124	Right-handed alpha
Helix 40	AE4	B	127	135	Right-handed 310
Helix 41	AE5	B	136	143	Right-handed 310
Helix 42	AE6	B	192	198	Right-handed 310
Helix 43	AE7	B	199	211	Right-handed alpha
Helix 44	AE8	B	295	299	Right-handed 310
Helix 45	AE9	B	305	318	Right-handed alpha
Helix 46	AF1	B	351	356	Right-handed alpha
Helix 47	AF2	B	379	383	Right-handed 310
Helix 48	AF3	B	399	405	Right-handed alpha
Helix 49	AF4	B	406	430	Right-handed alpha
Helix 50	AF5	B	430	452	Right-handed alpha
Helix 51	AF6	B	455	461	Right-handed alpha
Helix 52	AF7	B	477	482	Right-handed alpha
Helix 53	AF8	B	498	504	Right-handed alpha
Helix 54	AF9	B	505	507	Right-handed 310
Helix 55	AG1	B	508	514	Right-handed alpha
Helix 56	AG2	B	525	533	Right-handed alpha
Helix 57	AG3	B	554	568	Right-handed alpha
Helix 58	AG4	B	568	579	Right-handed alpha
Helix 59	AG5	B	607	621	Right-handed alpha
Helix 60	AG6	B	640	653	Right-handed alpha
Helix 61	AG7	B	656	674	Right-handed alpha
Helix 62	AG8	B	680	697	Right-handed alpha
Helix 63	AG9	C	52	57	Right-handed alpha
Helix 64	AH1	C	62	64	Right-handed 310
Helix 65	AH2	C	70	73	Right-handed 310
Helix 66	AH3	C	80	88	Right-handed alpha
Helix 67	AH4	C	115	136	Right-handed alpha
Helix 68	AH5	C	151	165	Right-handed alpha
Helix 69	AH6	C	175	183	Right-handed alpha
Helix 70	AH7	C	229	250	Right-handed alpha
Helix 71	AH8	C	252	255	Right-handed 310
Helix 72	AH9	C	256	277	Right-handed alpha
Helix 73	AI1	C	299	306	Right-handed alpha
Helix 74	AI2	C	306	312	Right-handed alpha
Helix 75	AI3	C	314	325	Right-handed alpha
Helix 76	AI4	C	327	331	Right-handed 310
Helix 77	AI5	C	338	342	Right-handed 310
Helix 78	AI6	C	343	354	Right-handed alpha
Helix 79	AI7	C	367	381	Right-handed alpha
Helix 80	AI8	C	388	395	Right-handed alpha
Helix 81	AI9	C	449	453	Right-handed 310
Helix 82	AJ1	C	635	639	Right-handed 310
Helix 83	AJ2	D	52	57	Right-handed alpha
Helix 84	AJ3	D	62	64	Right-handed 310
Helix 85	AJ4	D	69	74	Right-handed alpha
Helix 86	AJ5	D	80	87	Right-handed alpha
Helix 87	AJ6	D	88	90	Right-handed 310
Helix 88	AJ7	D	115	136	Right-handed alpha
Helix 89	AJ8	D	151	166	Right-handed alpha
Helix 90	AJ9	D	175	183	Right-handed alpha
Helix 91	AK1	D	230	250	Right-handed alpha
Helix 92	AK2	D	256	274	Right-handed alpha
Helix 93	AK3	D	299	306	Right-handed alpha
Helix 94	AK4	D	306	313	Right-handed alpha
Helix 95	AK5	D	314	324	Right-handed alpha
Helix 96	AK6	D	338	342	Right-handed 310
Helix 97	AK7	D	343	354	Right-handed alpha
Helix 98	AK8	D	367	381	Right-handed alpha
Helix 99	AK9	E	219	238	Right-handed alpha
Helix 100	AL1	E	240	255	Right-handed alpha
Helix 101	AL2	E	258	273	Right-handed alpha
Helix 102	AL3	E	274	292	Right-handed alpha
Helix 103	AL4	E	295	313	Right-handed alpha
Helix 104	AL5	E	315	330	Right-handed alpha
Helix 105	AL6	E	332	355	Right-handed alpha
Helix 106	AL7	E	356	372	Right-handed alpha
Helix 107	AL8	E	375	390	Right-handed alpha
Helix 108	AL9	E	393	407	Right-handed alpha
Helix 109	AM1	E	409	424	Right-handed alpha
Helix 110	AM2	E	427	441	Right-handed alpha
Helix 111	AM3	E	443	458	Right-handed alpha
Helix 112	AM4	E	461	478	Right-handed alpha
Helix 113	AM5	E	481	490	Right-handed alpha
Helix 114	AM6	E	492	501	Right-handed alpha
Helix 115	AM7	E	501	514	Right-handed alpha
Helix 116	AM8	E	514	522	Right-handed alpha
Helix 117	AM9	E	524	537	Right-handed alpha
Helix 118	AN1	F	532	539	Right-handed alpha
Helix 119	AN2	F	558	580	Right-handed alpha
Helix 120	AN3	F	583	587	Right-handed 310
Helix 121	AN4	F	588	617	Right-handed alpha
Helix 122	AN5	F	630	635	Right-handed alpha
Helix 123	AN6	F	636	657	Right-handed alpha
Helix 124	AN7	F	659	672	Right-handed alpha
Helix 125	AN8	F	682	706	Right-handed alpha
Helix 126	AN9	F	708	742	Right-handed alpha
Helix 127	AO1	F	743	746	Right-handed 310
Helix 128	AO2	F	750	765	Right-handed alpha

There are 23 sheets in PDB entry 7KW7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	21	first strand
Strand 2	A	169	174	anti-parallel
Strand 3	A	160	164	anti-parallel
Strand 4	A	145	153	anti-parallel
Strand 5	A	183	190	anti-parallel
Strand 6	A	88	93	anti-parallel
Strand 7	A	78	83	anti-parallel
Strand 8	A	218	222	parallel
Strand 9	A	286	289	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	368	371	first strand
Strand 2	A	361	365	anti-parallel
Strand 3	A	386	391	parallel
Strand 4	A	337	344	anti-parallel
Strand 5	A	323	333	anti-parallel
Strand 6	C	216	225	anti-parallel
Strand 7	C	205	213	anti-parallel
Strand 8	C	193	200	anti-parallel
Strand 9	C	333	337	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	475	476	first strand
Strand 2	A	464	467	anti-parallel
Strand 3	A	518	521	anti-parallel
Strand 4	A	490	495	parallel
Strand 5	A	539	543	parallel
Strand 6	A	535	536	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	585	588	first strand
Strand 2	A	632	636	parallel
Strand 3	A	597	601	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	18	19	first strand
Strand 2	B	170	174	anti-parallel
Strand 3	B	159	164	anti-parallel
Strand 4	B	145	153	anti-parallel
Strand 5	B	183	190	anti-parallel
Strand 6	B	88	93	anti-parallel
Strand 7	B	78	83	anti-parallel
Strand 8	B	218	222	parallel
Strand 9	B	286	289	anti-parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	368	371	first strand
Strand 2	B	361	365	anti-parallel
Strand 3	B	386	391	parallel
Strand 4	B	337	344	anti-parallel
Strand 5	B	323	333	anti-parallel
Strand 6	D	216	225	anti-parallel
Strand 7	D	205	213	anti-parallel
Strand 8	D	194	200	anti-parallel
Strand 9	D	333	337	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	475	476	first strand
Strand 2	B	464	467	anti-parallel
Strand 3	B	518	521	anti-parallel
Strand 4	B	490	495	parallel
Strand 5	B	539	543	parallel
Strand 6	B	535	536	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	585	588	first strand
Strand 2	B	632	636	parallel
Strand 3	B	597	601	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	28	first strand
Strand 2	C	15	22	anti-parallel
Strand 3	C	37	39	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	28	first strand
Strand 2	C	15	22	anti-parallel
Strand 3	C	7	11	anti-parallel
Strand 4	C	141	146	parallel
Strand 5	C	168	174	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	49	51	first strand
Strand 2	C	41	44	anti-parallel
Strand 3	C	66	68	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	93	95	first strand
Strand 2	C	102	107	anti-parallel
Strand 3	C	110	114	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	279	288	first strand
Strand 2	C	291	298	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	409	414	first strand
Strand 2	C	401	405	anti-parallel
Strand 3	C	437	444	anti-parallel
Strand 4	C	454	462	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	498	503	first strand
Strand 2	C	486	492	anti-parallel
Strand 3	C	474	480	anti-parallel
Strand 4	C	422	430	anti-parallel
Strand 5	F	522	523	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	25	28	first strand
Strand 2	D	15	22	anti-parallel
Strand 3	D	37	39	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	25	28	first strand
Strand 2	D	15	22	anti-parallel
Strand 3	D	7	11	anti-parallel
Strand 4	D	141	146	parallel
Strand 5	D	168	174	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	49	51	first strand
Strand 2	D	42	44	anti-parallel
Strand 3	D	66	67	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	93	96	first strand
Strand 2	D	101	107	anti-parallel
Strand 3	D	110	114	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	279	288	first strand
Strand 2	D	291	298	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	541	542	first strand
Strand 2	F	530	531	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	622	624	first strand
Strand 2	F	627	628	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	674	676	first strand
Strand 2	F	769	771	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7KW7

Analysis of interatomic Contacts of Structural Units in PDB entry:
7KW7