Analysis of interatomic Contacts of Structural Units in PDB entry:
7KWS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KWS entry

There are 2 chains in PDB entry 7KWS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 392
B
 MET 1THR 391
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 7KWS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 21Right-handed alpha
Helix 2
AA2
A
33 42Right-handed alpha
Helix 3
AA3
A
49 59Right-handed alpha
Helix 4
AA4
A
68 74Right-handed alpha
Helix 5
AA5
A
96 111Right-handed alpha
Helix 6
AA6
A
124 134Right-handed alpha
Helix 7
AA7
A
149 156Right-handed alpha
Helix 8
AA8
A
166 180Right-handed alpha
Helix 9
AA9
A
191 223Right-handed alpha
Helix 10
AB1
A
226 236Right-handed alpha
Helix 11
AB2
A
254 267Right-handed alpha
Helix 12
AB3
A
273 296Right-handed alpha
Helix 13
AB4
A
318 331Right-handed alpha
Helix 14
AB5
A
356 364Right-handed alpha
Helix 15
AB6
A
373 381Right-handed 310
Helix 16
AB7
B
9 21Right-handed alpha
Helix 17
AB8
B
33 42Right-handed alpha
Helix 18
AB9
B
53 58Right-handed alpha
Helix 19
AC1
B
68 74Right-handed alpha
Helix 20
AC2
B
96 110Right-handed alpha
Helix 21
AC3
B
124 134Right-handed alpha
Helix 22
AC4
B
149 156Right-handed alpha
Helix 23
AC5
B
166 178Right-handed alpha
Helix 24
AC6
B
191 224Right-handed alpha
Helix 25
AC7
B
226 236Right-handed alpha
Helix 26
AC8
B
255 267Right-handed alpha
Helix 27
AC9
B
273 296Right-handed alpha
Helix 28
AD1
B
318 331Right-handed alpha
Helix 29
AD2
B
356 364Right-handed alpha
Helix 30
AD3
B
373 378Right-handed alpha
Helix 31
AD4
B
379 381Right-handed 310
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There are 8 sheets in PDB entry 7KWS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 66first strand
Strand 2
A
26 30parallel
Strand 3
A
2 6parallel
Strand 4
A
78 81parallel
Strand 5
A
114 117parallel
Strand 6
A
138 140parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 88first strand
Strand 2
A
93 95anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 162first strand
Strand 2
A
187 189parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 348first strand
Strand 2
A
351 353anti-parallel
Strand 3
A
335 339parallel
Strand 4
A
300 304parallel
Strand 5
A
366 368parallel
Strand 6
A
383 384parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 66first strand
Strand 2
B
26 30parallel
Strand 3
B
2 6parallel
Strand 4
B
78 81parallel
Strand 5
B
114 117parallel
Strand 6
B
138 140parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 87first strand
Strand 2
B
94 95anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
160 162first strand
Strand 2
B
187 189parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 348first strand
Strand 2
B
351 353anti-parallel
Strand 3
B
335 339parallel
Strand 4
B
300 304parallel
Strand 5
B
366 368parallel
Strand 6
B
383 384parallel
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