Analysis of interatomic Contacts of Structural Units in PDB entry:
7KZ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KZ8 entry

There is 1 chain in PDB entry 7KZ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 28ASN 504
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7KZ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 46Right-handed 310
Helix 2
AA2
A
48 56Right-handed alpha
Helix 3
AA3
A
105 119Right-handed alpha
Helix 4
AA4
A
125 129Right-handed 310
Helix 5
AA5
A
151 157Right-handed alpha
Helix 6
AA6
A
158 163Right-handed 310
Helix 7
AA7
A
166 174Right-handed alpha
Helix 8
AA8
A
174 179Right-handed alpha
Helix 9
AA9
A
209 213Right-handed 310
Helix 10
AB1
A
225 235Right-handed alpha
Helix 11
AB2
A
245 247Right-handed 310
Helix 12
AB3
A
248 254Right-handed alpha
Helix 13
AB4
A
277 281Right-handed 310
Helix 14
AB5
A
282 292Right-handed alpha
Helix 15
AB6
A
294 304Right-handed alpha
Helix 16
AB7
A
331 342Right-handed alpha
Helix 17
AB8
A
357 373Right-handed alpha
Helix 18
AB9
A
384 386Right-handed 310
Helix 19
AC1
A
387 394Right-handed alpha
Helix 20
AC2
A
411 420Right-handed alpha
Helix 21
AC3
A
424 429Right-handed alpha
Helix 22
AC4
A
433 446Right-handed alpha
Helix 23
AC5
A
448 467Right-handed alpha
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There are 5 sheets in PDB entry 7KZ8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 194first strand
Strand 2
A
198 203anti-parallel
Strand 3
A
217 222anti-parallel
Strand 4
A
29 34parallel
Strand 5
A
240 241parallel
Strand 6
A
477 482anti-parallel
Strand 7
A
258 263anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 65first strand
Strand 2
A
72 74anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 82first strand
Strand 2
A
88 93anti-parallel
Strand 3
A
141 146anti-parallel
Strand 4
A
131 135anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
308 309first strand
Strand 2
A
469 474anti-parallel
Strand 3
A
268 273anti-parallel
Strand 4
A
399 404anti-parallel
Strand 5
A
348 354parallel
Strand 6
A
377 383parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
485 486first strand
Strand 2
A
502 503anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il