Analysis of interatomic Contacts of Structural Units in PDB entry:
7KZU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7KZU entry

There is 1 chain in PDB entry 7KZU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1LEU 550
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7KZU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 57Right-handed alpha
Helix 2
AA2
A
61 63Right-handed 310
Helix 3
AA3
A
69 72Right-handed 310
Helix 4
AA4
A
79 89Right-handed alpha
Helix 5
AA5
A
111 132Right-handed alpha
Helix 6
AA6
A
147 161Right-handed alpha
Helix 7
AA7
A
171 183Right-handed alpha
Helix 8
AA8
A
228 249Right-handed alpha
Helix 9
AA9
A
251 254Right-handed 310
Helix 10
AB1
A
255 273Right-handed alpha
Helix 11
AB2
A
302 328Right-handed alpha
Helix 12
AB3
A
330 334Right-handed 310
Helix 13
AB4
A
341 345Right-handed 310
Helix 14
AB5
A
346 358Right-handed alpha
Helix 15
AB6
A
369 384Right-handed alpha
Helix 16
AB7
A
508 526Right-handed alpha
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There are 8 sheets in PDB entry 7KZU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 26first strand
Strand 2
A
13 20anti-parallel
Strand 3
A
36 37anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 26first strand
Strand 2
A
13 20anti-parallel
Strand 3
A
4 8anti-parallel
Strand 4
A
137 142parallel
Strand 5
A
164 170parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 50first strand
Strand 2
A
39 42anti-parallel
Strand 3
A
65 67anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 95first strand
Strand 2
A
101 105anti-parallel
Strand 3
A
108 110anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 340first strand
Strand 2
A
188 195parallel
Strand 3
A
200 209anti-parallel
Strand 4
A
214 224anti-parallel
Strand 5
A
389 392parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 289first strand
Strand 2
A
292 301anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
407 412first strand
Strand 2
A
399 403anti-parallel
Strand 3
A
435 442anti-parallel
Strand 4
A
452 460anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
498 502first strand
Strand 2
A
484 490anti-parallel
Strand 3
A
472 478anti-parallel
Strand 4
A
420 428anti-parallel
Strand 5
A
547 549parallel
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