Analysis of interatomic Contacts of Structural Units in PDB entry:
7L00


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7L00 entry

There are 4 chains in PDB entry 7L00 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0LEU 309
B
 SER -1LEU 309
C
 VAL -5LEU 309
D
 VAL -5LEU 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 7L00. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 9Right-handed alpha
Helix 2
AA2
A
24 34Right-handed alpha
Helix 3
AA3
A
46 61Right-handed alpha
Helix 4
AA4
A
75 86Right-handed alpha
Helix 5
AA5
A
98 100Right-handed 310
Helix 6
AA6
A
101 108Right-handed alpha
Helix 7
AA7
A
118 128Right-handed alpha
Helix 8
AA8
A
148 160Right-handed alpha
Helix 9
AA9
A
172 182Right-handed alpha
Helix 10
AB1
A
190 195Right-handed alpha
Helix 11
AB2
A
202 211Right-handed alpha
Helix 12
AB3
A
221 225Right-handed 310
Helix 13
AB4
A
233 245Right-handed alpha
Helix 14
AB5
A
248 256Right-handed alpha
Helix 15
AB6
A
258 265Right-handed alpha
Helix 16
AB7
A
277 283Right-handed 310
Helix 17
AB8
A
288 304Right-handed alpha
Helix 18
AB9
B
2 9Right-handed alpha
Helix 19
AC1
B
24 34Right-handed alpha
Helix 20
AC2
B
46 61Right-handed alpha
Helix 21
AC3
B
75 86Right-handed alpha
Helix 22
AC4
B
98 100Right-handed 310
Helix 23
AC5
B
101 108Right-handed alpha
Helix 24
AC6
B
118 128Right-handed alpha
Helix 25
AC7
B
148 160Right-handed alpha
Helix 26
AC8
B
172 182Right-handed alpha
Helix 27
AC9
B
190 195Right-handed alpha
Helix 28
AD1
B
202 212Right-handed alpha
Helix 29
AD2
B
233 245Right-handed alpha
Helix 30
AD3
B
248 257Right-handed alpha
Helix 31
AD4
B
258 265Right-handed alpha
Helix 32
AD5
B
277 283Right-handed 310
Helix 33
AD6
B
288 304Right-handed alpha
Helix 34
AD7
C
2 9Right-handed alpha
Helix 35
AD8
C
24 34Right-handed alpha
Helix 36
AD9
C
46 61Right-handed alpha
Helix 37
AE1
C
75 86Right-handed alpha
Helix 38
AE2
C
98 100Right-handed 310
Helix 39
AE3
C
101 109Right-handed alpha
Helix 40
AE4
C
118 128Right-handed alpha
Helix 41
AE5
C
148 160Right-handed alpha
Helix 42
AE6
C
172 182Right-handed alpha
Helix 43
AE7
C
190 195Right-handed alpha
Helix 44
AE8
C
202 212Right-handed alpha
Helix 45
AE9
C
221 225Right-handed 310
Helix 46
AF1
C
233 245Right-handed alpha
Helix 47
AF2
C
248 257Right-handed alpha
Helix 48
AF3
C
258 265Right-handed alpha
Helix 49
AF4
C
277 283Right-handed 310
Helix 50
AF5
C
288 304Right-handed alpha
Helix 51
AF6
D
2 9Right-handed alpha
Helix 52
AF7
D
24 34Right-handed alpha
Helix 53
AF8
D
46 61Right-handed alpha
Helix 54
AF9
D
75 86Right-handed alpha
Helix 55
AG1
D
98 100Right-handed 310
Helix 56
AG2
D
101 109Right-handed alpha
Helix 57
AG3
D
118 128Right-handed alpha
Helix 58
AG4
D
148 160Right-handed alpha
Helix 59
AG5
D
172 182Right-handed alpha
Helix 60
AG6
D
190 195Right-handed alpha
Helix 61
AG7
D
202 211Right-handed alpha
Helix 62
AG8
D
221 225Right-handed 310
Helix 63
AG9
D
233 245Right-handed alpha
Helix 64
AH1
D
248 257Right-handed alpha
Helix 65
AH2
D
258 265Right-handed alpha
Helix 66
AH3
D
277 283Right-handed 310
Helix 67
AH4
D
288 304Right-handed alpha
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There are 8 sheets in PDB entry 7L00. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 16first strand
Strand 2
A
186 189parallel
Strand 3
A
164 167parallel
Strand 4
A
133 136parallel
Strand 5
A
111 116parallel
Strand 6
A
90 94parallel
Strand 7
A
65 70parallel
Strand 8
A
38 41parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 143first strand
Strand 2
A
228 231anti-parallel
Strand 3
A
217 220anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 16first strand
Strand 2
B
186 189parallel
Strand 3
B
164 167parallel
Strand 4
B
133 136parallel
Strand 5
B
111 116parallel
Strand 6
B
90 94parallel
Strand 7
B
65 70parallel
Strand 8
B
38 41parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 143first strand
Strand 2
B
228 231anti-parallel
Strand 3
B
217 220anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
14 16first strand
Strand 2
C
186 189parallel
Strand 3
C
164 167parallel
Strand 4
C
133 136parallel
Strand 5
C
111 116parallel
Strand 6
C
90 94parallel
Strand 7
C
65 70parallel
Strand 8
C
38 41parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
142 143first strand
Strand 2
C
228 231anti-parallel
Strand 3
C
217 220anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
14 16first strand
Strand 2
D
186 189parallel
Strand 3
D
164 167parallel
Strand 4
D
133 136parallel
Strand 5
D
111 116parallel
Strand 6
D
90 94parallel
Strand 7
D
65 70parallel
Strand 8
D
38 41parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
142 143first strand
Strand 2
D
228 231anti-parallel
Strand 3
D
217 220anti-parallel
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