Analysis of interatomic Contacts of Structural Units in PDB entry:
7L07


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7L07 entry

There is 1 chain in PDB entry 7L07 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 2GLU 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 7L07. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 31Right-handed alpha
Helix 2
AA2
A
57 72Right-handed alpha
Helix 3
AA3
A
84 98Right-handed alpha
Helix 4
AA4
A
117 130Right-handed alpha
Helix 5
AA5
A
131 134Right-handed 310
Helix 6
AA6
A
140 149Right-handed alpha
Helix 7
AA7
A
155 169Right-handed alpha
Helix 8
AA8
A
217 227Right-handed alpha
Helix 9
AA9
A
230 244Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 7L07.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
34 43anti-parallel
Strand 3
A
6 13parallel
Strand 4
A
76 79parallel
Strand 5
A
103 105parallel
Strand 6
A
136 137parallel
Strand 7
A
173 176parallel
Strand 8
A
189 192anti-parallel
Strand 9
A
197 200anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il