Analysis of interatomic Contacts of Structural Units in PDB entry:
7L0Q

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7L0Q entry

There are 5 chains in PDB entry 7L0Q (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	ASN 52	ALA 385
D	ARG 8	LEU 13
A	GLY 2	PHE 354
B	LEU 30	ASN 340
G	MET 31	GLY 69

There are 28 helices in PDB entry 7L0Q. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	60	90	Right-handed alpha
Helix 2	AA2	C	102	128	Right-handed alpha
Helix 3	AA3	C	138	172	Right-handed alpha
Helix 4	AA4	C	173	180	Right-handed alpha
Helix 5	AA5	C	182	206	Right-handed alpha
Helix 6	AA6	C	230	269	Right-handed alpha
Helix 7	AA7	C	298	334	Right-handed alpha
Helix 8	AA8	C	340	371	Right-handed alpha
Helix 9	AA9	C	373	385	Right-handed alpha
Helix 10	AB1	A	4	7	Right-handed 310
Helix 11	AB2	A	8	33	Right-handed alpha
Helix 12	AB3	A	45	55	Right-handed alpha
Helix 13	AB4	A	65	68	Right-handed 310
Helix 14	AB5	A	69	92	Right-handed alpha
Helix 15	AB6	A	99	114	Right-handed alpha
Helix 16	AB7	A	120	133	Right-handed alpha
Helix 17	AB8	A	133	141	Right-handed alpha
Helix 18	AB9	A	142	146	Right-handed 310
Helix 19	AC1	A	151	158	Right-handed alpha
Helix 20	AC2	A	158	163	Right-handed alpha
Helix 21	AC3	A	170	176	Right-handed alpha
Helix 22	AC4	A	200	204	Right-handed 310
Helix 23	AC5	A	211	216	Right-handed 310
Helix 24	AC6	A	241	255	Right-handed alpha
Helix 25	AC7	A	270	281	Right-handed alpha
Helix 26	AC8	A	295	309	Right-handed alpha
Helix 27	AC9	A	329	349	Right-handed alpha
Helix 28	AD1	G	32	48	Right-handed alpha

There are 11 sheets in PDB entry 7L0Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	208	212	first strand
Strand 2	C	223	227	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	190	191	first strand
Strand 2	A	194	195	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	220	222	first strand
Strand 2	A	263	269	parallel
Strand 3	A	225	226	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	220	222	first strand
Strand 2	A	263	269	parallel
Strand 3	A	319	323	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	51	first strand
Strand 2	B	336	339	anti-parallel
Strand 3	B	327	330	anti-parallel
Strand 4	B	317	320	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	88	94	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	104	105	first strand
Strand 2	B	111	114	anti-parallel
Strand 3	B	122	125	anti-parallel
Strand 4	B	135	138	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	153	first strand
Strand 2	B	156	160	anti-parallel
Strand 3	B	166	170	anti-parallel
Strand 4	B	176	180	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	192	first strand
Strand 2	B	199	203	anti-parallel
Strand 3	B	208	210	anti-parallel
Strand 4	B	220	222	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	235	first strand
Strand 2	B	240	245	anti-parallel
Strand 3	B	250	254	anti-parallel
Strand 4	B	259	264	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	277	first strand
Strand 2	B	284	289	anti-parallel
Strand 3	B	294	298	anti-parallel
Strand 4	B	306	308	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7L0Q

Analysis of interatomic Contacts of Structural Units in PDB entry:
7L0Q