Analysis of interatomic Contacts of Structural Units in PDB entry:
7L0S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7L0S entry

There are 5 chains in PDB entry 7L0S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ASN 52ALA 385
D
 ARG 8LEU 13
A
 GLY 2PHE 354
B
 LEU 30ASN 340
G
 MET 31GLY 69
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 7L0S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
60 91Right-handed alpha
Helix 2
AA2
C
100 129Right-handed alpha
Helix 3
AA3
C
137 173Right-handed alpha
Helix 4
AA4
C
173 181Right-handed alpha
Helix 5
AA5
C
182 202Right-handed alpha
Helix 6
AA6
C
202 207Right-handed alpha
Helix 7
AA7
C
230 270Right-handed alpha
Helix 8
AA8
C
300 334Right-handed alpha
Helix 9
AA9
C
340 371Right-handed alpha
Helix 10
AB1
C
373 385Right-handed alpha
Helix 11
AB2
A
7 32Right-handed alpha
Helix 12
AB3
A
45 55Right-handed alpha
Helix 13
AB4
A
65 68Right-handed 310
Helix 14
AB5
A
69 92Right-handed alpha
Helix 15
AB6
A
99 114Right-handed alpha
Helix 16
AB7
A
120 133Right-handed alpha
Helix 17
AB8
A
133 141Right-handed alpha
Helix 18
AB9
A
142 146Right-handed 310
Helix 19
AC1
A
151 158Right-handed alpha
Helix 20
AC2
A
158 163Right-handed alpha
Helix 21
AC3
A
170 176Right-handed alpha
Helix 22
AC4
A
202 204Right-handed 310
Helix 23
AC5
A
207 216Right-handed 310
Helix 24
AC6
A
228 231Right-handed 310
Helix 25
AC7
A
241 255Right-handed alpha
Helix 26
AC8
A
270 281Right-handed alpha
Helix 27
AC9
A
295 308Right-handed alpha
Helix 28
AD1
A
331 351Right-handed alpha
Helix 29
AD2
G
32 48Right-handed alpha
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There are 9 sheets in PDB entry 7L0S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
208 212first strand
Strand 2
C
223 227anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 190first strand
Strand 2
A
195 200anti-parallel
Strand 3
A
34 39parallel
Strand 4
A
220 226parallel
Strand 5
A
263 269parallel
Strand 6
A
320 323parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 51first strand
Strand 2
B
336 339anti-parallel
Strand 3
B
327 331anti-parallel
Strand 4
B
315 320anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 63first strand
Strand 2
B
69 74anti-parallel
Strand 3
B
78 83anti-parallel
Strand 4
B
88 94anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 105first strand
Strand 2
B
111 116anti-parallel
Strand 3
B
121 125anti-parallel
Strand 4
B
135 139anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 151first strand
Strand 2
B
156 160anti-parallel
Strand 3
B
166 170anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
187 192first strand
Strand 2
B
198 203anti-parallel
Strand 3
B
208 212anti-parallel
Strand 4
B
220 222anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
229 234first strand
Strand 2
B
240 245anti-parallel
Strand 3
B
250 254anti-parallel
Strand 4
B
260 264anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
273 278first strand
Strand 2
B
284 289anti-parallel
Strand 3
B
294 298anti-parallel
Strand 4
B
303 308anti-parallel
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